Hi Sam, I am facing similar problems to do FIRMA analysis using Mouse Exon 1.0 ST Array. Have you solved your problems. My specific questions are :
1) I was trying to use brainarray ensemble custom cdfs. There are three cdfs corresponding to it, namely ENSG, ENSE and ENST. Which one to use and how? 2) Where could I find MoEx-1_0-st-v1,U-Ensembl50,G-Affy,EP.cdf, it is no more available in aroma webpage? Thank You Rishi -- -- When reporting problems on aroma.affymetrix, make sure 1) to run the latest version of the package, 2) to report the output of sessionInfo() and traceback(), and 3) to post a complete code example. You received this message because you are subscribed to the Google Groups "aroma.affymetrix" group with website http://www.aroma-project.org/. To post to this group, send email to email@example.com To unsubscribe and other options, go to http://www.aroma-project.org/forum/ --- You received this message because you are subscribed to the Google Groups "aroma.affymetrix" group. To unsubscribe from this group and stop receiving emails from it, send an email to aroma-affymetrix+unsubscr...@googlegroups.com. For more options, visit https://groups.google.com/d/optout.