On Wed, 13 Aug 2003 11:03:14 +0100, andrew warry (BITS) wrote:
> On 05 August 2003 17:31, Marcus Claesson wrote:
>> 4. In for example the SMART output there are many URLs. Is it possible
>> to include some HTML viewer in Artemis or to start up a web-browser for
>> viewing these links?
> I was wondering about this as well and discovered the script
> results_to_netscape hidden away in the etc folder. If you change
> sanger_options to yes in the options file, Artemis uses this script
> to allow the viewing of blast searches in Netscape with links to the
> sanger SRS site.
> I added the lines:
> if ($_ =~ /http/){
> ($_ =~ s/(http\:\/\/([\S.\/]+))/<a href=\"$1\">$1<\/a>/gi);
> }
> in the while(<INFILE>) loop and this (very crudely) changes the http
> addresses in the SMART results file into links
> With some improvements perhaps the option of using a browser
> (probably not Netscape!) to view the results could become standard in
> future versions?
Thanks for the suggestion. I'll look into that.
Kim.
