On Fri, 12 Dec 2003 10:06:14 +0000, Kim Rutherford wrote: > On Thu, 11 Dec 2003 14:52:47 -0600, Brooke Peterson-Burch wrote: >> Hi, I have no archive of this mailing list so apologize if this is a >> repeat.
>> I would appreciate learning of any scripts that already exist to >> reformat any of the Artemis output formats into one compatable with >> NCBI's tbl2asn program. If there are other methods to submit genome >> sequences and annotations other than through the Seqin software >> those would be fine too, I'm not set on submitting to GenBank only, >> any of the big three would do. > Hi. You can use the "Save An Entry As"->"GENBANK Format" to create a > Genbank format file of the features and sequence. You will need to > add a Genbank header to the file with a text editor before passing > the file to tbl2asn. I think I spoke too soon. I didn't realise that NCBI has two feature table formats - one for GenBank entries and a different format for tbl2asn. My suggestion isn't going to help you. Sorry about that. Kim.
