Hello,
I've written a perl script that produces feature tables, and for
some reason artemis won't read them. The tables contain entries
like this:
FT repeat_region 149128..149141
FT /label={t}13
FT /note="(t)13"
FT repeat_region 15162..15190
FT /label={tt-tt}14
FT /note="(tt-tt)14"
FT repeat_region 35971..35997
FT /label={tt-aa}13
FT /note="(tt-aa)13"
The typical errors are as follows:
failed to open <file>: sequence file contains a character that is not a letter
I'm starting artemis (v. 7) with:
./art genbank_file +feature_table
Strangely, I've used similar code in other perl scripts without problems.
Can anyone suggest a cause and/or a cure?
Thanks,
Milo Thurston.
--
Dr. Milo Thurston, CEH Oxford, Mansfield Road, Oxford, OX1 3SR.
'phone 01865 281658, fax 01865 281696.
http://www.genomics.ceh.ac.uk/lab/
_______________________________________________
Artemis-users mailing list
[email protected]
http://lists.sanger.ac.uk/mailman/listinfo/artemis-users
