Hey Tim, thanks for the reply. What about for the Mac OSX distribution, where the options file appears to be located within the application package itself (though within there I can't seem to find it)? Can the -options argument passed at the command line still specify a set of options to override the default ones? If so, would the format of this new options file be similar to that found in the options file of, say, a unix distribution of Artemis?

Thanks,
Andrew


On Dec 6, 2006, at 3:09 AM, Tim Carver wrote:

Hi Andrew

The colours and the default colours for features are defined in the ‘etc/options’ file in the distribution.
This gives you some more on this:

http://www.sanger.ac.uk/Software/Artemis/v8/manual/ concepts.html#CONCEPTS-COLOUR

Regards
Tim

On 5/12/06 22:47, "Andrew Stewart" <[EMAIL PROTECTED]> wrote:

Some features are drawn in Artemis with a certain color, presumably determined by the primary_tag or other attribute, while other features can override the color drawn (or include one if none appears by default) by setting the color tag on the given feature.

Is there some table that determines the default colors associated with a given feature/attribute, and is this table accessible (either through the Artemis interface or through some configuration file) or is it more or less hard coded into the Artemis source code?


Thanks!
-Andrew


--
Andrew Stewart
Research Assistant, Genomics Team
Navy Medical Research Center (NMRC)
Biological Defense Research Directorate (BDRD)
BDRD Annex
12300 Washington Avenue, 2nd Floor
Rockville, MD 20852

email: [EMAIL PROTECTED]
phone: 301-231-6700 Ext 270




_______________________________________________
Artemis-users mailing list
[email protected]
http://lists.sanger.ac.uk/mailman/listinfo/artemis-users




--
Andrew Stewart
Research Assistant, Genomics Team
Navy Medical Research Center (NMRC)
Biological Defense Research Directorate (BDRD)
BDRD Annex
12300 Washington Avenue, 2nd Floor
Rockville, MD 20852

email: [EMAIL PROTECTED]
phone: 301-231-6700 Ext 270


_______________________________________________
Artemis-users mailing list
[email protected]
http://lists.sanger.ac.uk/mailman/listinfo/artemis-users

Reply via email to