Dear Sir, I have generated a alignment file in .bam format(.bam format is sorted and indexed). I am facing problem while viewing it in artemis. 1. loaded reference file in .gff format. 2. From "Read BAM/VCF" tab, I load .bam file
error is generated "length of sequence loaded does not match the length of the default reference sequence in the BAM (psu|M76611)" but psu|M76611 which is mitochondrial genome of plasmodium is of same length in GFF file and the file from which index of .bam was generated. Plz help to trouble-shoot this issue. Regards, Zeenia Jagga _______________________________________________ Artemis-users mailing list Artemis-users@sanger.ac.uk http://lists.sanger.ac.uk/mailman/listinfo/artemis-users
