Bugs item #3521044, was opened at 2012-04-24 06:44 Message generated for change (Settings changed) made by ghutchis You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=835077&aid=3521044&group_id=165310
Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: Commands / Extensions Group: v 1.1.0 Status: Pending Resolution: Accepted >Priority: 8 Private: No Submitted By: Jens Thomas (jensthomas) Assigned to: Geoff Hutchison (ghutchis) Summary: Crash viewing properties after optimisation Initial Comment: Create/load a molecule. Select: Extensions->Optimize Geometry. Select: View -> Properties -> Molecule Properties. This generates the following seg faut: Thread 0 Crashed:: Dispatch queue: com.apple.main-thread 0 libstdc++.6.dylib 0x00007fff8ba29bde std::ostream::sentry::sentry(std::ostream&) + 24 1 libstdc++.6.dylib 0x00007fff8ba2b5bf std::basic_ostream<char, std::char_traits<char> >& std::__ostream_insert<char, std::char_traits<char> >(std::basic_ostream<char, std::char_traits<char> >&, char const*, long) + 39 2 libstdc++.6.dylib 0x00007fff8ba2b7ea std::basic_ostream<char, std::char_traits<char> >& std::operator<< <std::char_traits<char> >(std::basic_ostream<char, std::char_traits<char> >&, char const*) + 68 3 libopenbabel.4.dylib 0x000000010b6e3177 OpenBabel::OBForceField::PrintTypes() + 55 (forcefield.h:1013) 4 libopenbabel.4.dylib 0x000000010b6e3500 OpenBabel::OBForceField::Setup(OpenBabel::OBMol&) + 378 (forcefield.cpp:890) 5 libavogadro.1.dylib 0x000000010b947939 Avogadro::Molecule::dipoleMoment(bool*) const + 145 (molecule.cpp:782) 6 molecularpropextension.so 0x0000000110b02b77 Avogadro::MolecularPropertiesExtension::update() + 797 (molecularpropextension.cpp:160) 7 molecularpropextension.so 0x0000000110b03307 Avogadro::MolecularPropertiesExtension::performAction(QAction*, Avogadro::GLWidget*) + 607 (molecularpropextension.cpp:128) 8 net.sourceforge 0x000000010a2731fc Avogadro::MainWindow::actionTriggered() + 84 9 net.sourceforge 0x000000010a270c8e Avogadro::MainWindow::qt_static_metacall(QObject*, QMetaObject::Call, int, void**) + 1442 10 QtCore 0x000000010b47b22e QMetaObject::activate(QObject*, QMetaObject const*, int, void**) + 1566 11 QtGui 0x000000010a5182c1 QAction::triggered(bool) + 49 12 QtGui 0x000000010a519654 QAction::activate(QAction::ActionEvent) + 180 13 QtGui 0x000000010a4cbf0a -[QCocoaMenuLoader qtDispatcherToQAction:] + 106 14 com.apple.CoreFoundation 0x00007fff86c9475d -[NSObject performSelector:withObject:] + 61 15 com.apple.AppKit 0x00007fff8d31ecb2 -[NSApplication sendAction:to:from:] + 139 16 com.apple.AppKit 0x00007fff8d40bfe7 -[NSMenuItem _corePerformAction] + 399 17 com.apple.AppKit 0x00007fff8d40bd1e -[NSCarbonMenuImpl performActionWithHighlightingForItemAtIndex:] + 125 18 com.apple.AppKit 0x00007fff8d6a9dd4 -[NSMenu _internalPerformActionForItemAtIndex:] + 38 19 com.apple.AppKit 0x00007fff8d53a3a9 -[NSCarbonMenuImpl _carbonCommandProcessEvent:handlerCallRef:] + 138 20 com.apple.AppKit 0x00007fff8d385b4b NSSLMMenuEventHandler + 339 21 com.apple.HIToolbox 0x00007fff8a514294 _ZL23DispatchEventToHandlersP14EventTargetRecP14OpaqueEventRefP14HandlerCallRec + 1263 22 com.apple.HIToolbox 0x00007fff8a5138a0 _ZL30SendEventToEventTargetInternalP14OpaqueEventRefP20OpaqueEventTargetRefP14HandlerCallRec + 446 23 com.apple.HIToolbox 0x00007fff8a52a677 SendEventToEventTarget + 76 24 com.apple.HIToolbox 0x00007fff8a5706c1 _ZL18SendHICommandEventjPK9HICommandjjhPKvP20OpaqueEventTargetRefS5_PP14OpaqueEventRef + 398 25 com.apple.HIToolbox 0x00007fff8a657c59 SendMenuCommandWithContextAndModifiers + 56 26 com.apple.HIToolbox 0x00007fff8a69e73d SendMenuItemSelectedEvent + 253 27 com.apple.HIToolbox 0x00007fff8a5697bb _ZL19FinishMenuSelectionP13SelectionDataP10MenuResultS2_ + 101 28 com.apple.HIToolbox 0x00007fff8a560f01 _ZL14MenuSelectCoreP8MenuData5PointdjPP13OpaqueMenuRefPt + 600 29 com.apple.HIToolbox 0x00007fff8a5604ca _HandleMenuSelection2 + 580 30 com.apple.AppKit 0x00007fff8d284fb2 _NSHandleCarbonMenuEvent + 250 31 com.apple.AppKit 0x00007fff8d21a4ad _DPSNextEvent + 2019 32 com.apple.AppKit 0x00007fff8d219861 -[NSApplication nextEventMatchingMask:untilDate:inMode:dequeue:] + 135 33 com.apple.AppKit 0x00007fff8d21619d -[NSApplication run] + 470 34 QtGui 0x000000010a4d7900 QEventDispatcherMac::processEvents(QFlags<QEventLoop::ProcessEventsFlag>) + 1824 35 QtCore 0x000000010b462094 QEventLoop::processEvents(QFlags<QEventLoop::ProcessEventsFlag>) + 68 36 QtCore 0x000000010b462444 QEventLoop::exec(QFlags<QEventLoop::ProcessEventsFlag>) + 324 37 QtCore 0x000000010b464b2c QCoreApplication::exec() + 188 38 net.sourceforge 0x000000010a26f38a main + 5786 39 net.sourceforge 0x000000010a262564 start + 52 This on: Model: MacBookAir4,2, BootROM MBA41.0077.B0F, 2 processors, Intel Core i5, 1.7 GHz, 4 GB, SMC 1.73f63 OS Version: Mac OS X 10.7.3 (11D50b) Using Qt 4.8.1 latest version of source as built with avogadro_squared ---------------------------------------------------------------------- Comment By: Geoff Hutchison (ghutchis) Date: 2012-06-13 20:53 Message: Please try this, it seems to fix the issue for me: http://review.source.kitware.com/#/t/813/ ---------------------------------------------------------------------- Comment By: Geoff Hutchison (ghutchis) Date: 2012-06-13 19:11 Message: Please check out this patch: http://review.source.kitware.com/6198 It seems to fix the problem for me. ---------------------------------------------------------------------- Comment By: Geoff Hutchison (ghutchis) Date: 2012-06-13 18:42 Message: Wow. Accepted. I'll see what's happening right now. Sorry I didn't get to the bug reports earlier. ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=835077&aid=3521044&group_id=165310 ------------------------------------------------------------------------------ Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/ _______________________________________________ Avogadro-devel mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/avogadro-devel
