Bugs item #3521044, was opened at 2012-04-24 06:44
Message generated for change (Comment added) made by ghutchis
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Category: Commands / Extensions
>Group: v 1.1.0
Status: Open
>Resolution: Accepted
Priority: 5
Private: No
Submitted By: Jens Thomas (jensthomas)
>Assigned to: Geoff Hutchison (ghutchis)
Summary: Crash viewing properties after optimisation

Initial Comment:
Create/load a molecule.
Select: Extensions->Optimize Geometry.
Select: View -> Properties -> Molecule Properties.

This generates the following seg faut:


Thread 0 Crashed:: Dispatch queue: com.apple.main-thread
0   libstdc++.6.dylib                   0x00007fff8ba29bde 
std::ostream::sentry::sentry(std::ostream&) + 24
1   libstdc++.6.dylib                   0x00007fff8ba2b5bf 
std::basic_ostream<char, std::char_traits<char> >& std::__ostream_insert<char, 
std::char_traits<char> >(std::basic_ostream<char, std::char_traits<char> >&, 
char const*, long) + 39
2   libstdc++.6.dylib                   0x00007fff8ba2b7ea 
std::basic_ostream<char, std::char_traits<char> >& std::operator<< 
<std::char_traits<char> >(std::basic_ostream<char, std::char_traits<char> >&, 
char const*) + 68
3   libopenbabel.4.dylib                0x000000010b6e3177 
OpenBabel::OBForceField::PrintTypes() + 55 (forcefield.h:1013)
4   libopenbabel.4.dylib                0x000000010b6e3500 
OpenBabel::OBForceField::Setup(OpenBabel::OBMol&) + 378 (forcefield.cpp:890)
5   libavogadro.1.dylib                 0x000000010b947939 
Avogadro::Molecule::dipoleMoment(bool*) const + 145 (molecule.cpp:782)
6   molecularpropextension.so           0x0000000110b02b77 
Avogadro::MolecularPropertiesExtension::update() + 797 
(molecularpropextension.cpp:160)
7   molecularpropextension.so           0x0000000110b03307 
Avogadro::MolecularPropertiesExtension::performAction(QAction*, 
Avogadro::GLWidget*) + 607 (molecularpropextension.cpp:128)
8   net.sourceforge                     0x000000010a2731fc 
Avogadro::MainWindow::actionTriggered() + 84
9   net.sourceforge                     0x000000010a270c8e 
Avogadro::MainWindow::qt_static_metacall(QObject*, QMetaObject::Call, int, 
void**) + 1442
10  QtCore                              0x000000010b47b22e 
QMetaObject::activate(QObject*, QMetaObject const*, int, void**) + 1566
11  QtGui                               0x000000010a5182c1 
QAction::triggered(bool) + 49
12  QtGui                               0x000000010a519654 
QAction::activate(QAction::ActionEvent) + 180
13  QtGui                               0x000000010a4cbf0a -[QCocoaMenuLoader 
qtDispatcherToQAction:] + 106
14  com.apple.CoreFoundation            0x00007fff86c9475d -[NSObject 
performSelector:withObject:] + 61
15  com.apple.AppKit                    0x00007fff8d31ecb2 -[NSApplication 
sendAction:to:from:] + 139
16  com.apple.AppKit                    0x00007fff8d40bfe7 -[NSMenuItem 
_corePerformAction] + 399
17  com.apple.AppKit                    0x00007fff8d40bd1e -[NSCarbonMenuImpl 
performActionWithHighlightingForItemAtIndex:] + 125
18  com.apple.AppKit                    0x00007fff8d6a9dd4 -[NSMenu 
_internalPerformActionForItemAtIndex:] + 38
19  com.apple.AppKit                    0x00007fff8d53a3a9 -[NSCarbonMenuImpl 
_carbonCommandProcessEvent:handlerCallRef:] + 138
20  com.apple.AppKit                    0x00007fff8d385b4b 
NSSLMMenuEventHandler + 339
21  com.apple.HIToolbox                 0x00007fff8a514294 
_ZL23DispatchEventToHandlersP14EventTargetRecP14OpaqueEventRefP14HandlerCallRec 
+ 1263
22  com.apple.HIToolbox                 0x00007fff8a5138a0 
_ZL30SendEventToEventTargetInternalP14OpaqueEventRefP20OpaqueEventTargetRefP14HandlerCallRec
 + 446
23  com.apple.HIToolbox                 0x00007fff8a52a677 
SendEventToEventTarget + 76
24  com.apple.HIToolbox                 0x00007fff8a5706c1 
_ZL18SendHICommandEventjPK9HICommandjjhPKvP20OpaqueEventTargetRefS5_PP14OpaqueEventRef
 + 398
25  com.apple.HIToolbox                 0x00007fff8a657c59 
SendMenuCommandWithContextAndModifiers + 56
26  com.apple.HIToolbox                 0x00007fff8a69e73d 
SendMenuItemSelectedEvent + 253
27  com.apple.HIToolbox                 0x00007fff8a5697bb 
_ZL19FinishMenuSelectionP13SelectionDataP10MenuResultS2_ + 101
28  com.apple.HIToolbox                 0x00007fff8a560f01 
_ZL14MenuSelectCoreP8MenuData5PointdjPP13OpaqueMenuRefPt + 600
29  com.apple.HIToolbox                 0x00007fff8a5604ca 
_HandleMenuSelection2 + 580
30  com.apple.AppKit                    0x00007fff8d284fb2 
_NSHandleCarbonMenuEvent + 250
31  com.apple.AppKit                    0x00007fff8d21a4ad _DPSNextEvent + 2019
32  com.apple.AppKit                    0x00007fff8d219861 -[NSApplication 
nextEventMatchingMask:untilDate:inMode:dequeue:] + 135
33  com.apple.AppKit                    0x00007fff8d21619d -[NSApplication run] 
+ 470
34  QtGui                               0x000000010a4d7900 
QEventDispatcherMac::processEvents(QFlags<QEventLoop::ProcessEventsFlag>) + 1824
35  QtCore                              0x000000010b462094 
QEventLoop::processEvents(QFlags<QEventLoop::ProcessEventsFlag>) + 68
36  QtCore                              0x000000010b462444 
QEventLoop::exec(QFlags<QEventLoop::ProcessEventsFlag>) + 324
37  QtCore                              0x000000010b464b2c 
QCoreApplication::exec() + 188
38  net.sourceforge                     0x000000010a26f38a main + 5786
39  net.sourceforge                     0x000000010a262564 start + 52


This on:

Model: MacBookAir4,2, BootROM MBA41.0077.B0F, 2 processors, Intel Core i5, 1.7 
GHz, 4 GB, SMC 1.73f63
OS Version:      Mac OS X 10.7.3 (11D50b)

Using Qt 4.8.1 latest version of source as built with avogadro_squared

----------------------------------------------------------------------

>Comment By: Geoff Hutchison (ghutchis)
Date: 2012-06-13 18:42

Message:
Wow. Accepted. I'll see what's happening right now. Sorry I didn't get to
the bug reports earlier.



----------------------------------------------------------------------

You can respond by visiting: 
https://sourceforge.net/tracker/?func=detail&atid=835077&aid=3521044&group_id=165310

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