Nicklas (>), Carl (>>): > > Reading the docs, I get different impressions -- do I want to > > implement a BASE2 plug-in for this, or is such a plug-in too tied to > > BASE2 to function within a plug-in in Bioclipse? If the latter, what > > approved ways are there to interact with BASE2 from without? I'm > > thinking along the lines of webservices. > > You can't do this with a plug-in. A plug-in is always located and > running on the BASE server and is used and executed from the web > interface. Since Bioclipse seems to be a Java program and has some kind > of plug-in structure you should be able to create code that use the > regular BASE API to let Bioclipse load data from BASE. > > If you want webservices you will have to do most of the work yourself. > We have been experimenting with this and there is a prototype branch and > a perl library for using it: > http://lev.thep.lu.se/trac/baseplugins/wiki/se.lu.thep.webservices_clients > It provides functionality for listing Affymetrix experiments and > downloading associated CEL and CDF files.
Excellent. This will most likely get me started on a prototype client. > Unfortunately the webservices branch is currently not working due to > some problems with the Subversion repository. See a previous mail about > for more information about this > http://www.mail-archive.com/basedb-devel@lists.sourceforge.net/msg00017.html Ok, no hurry. In the meantime I'll investigate more closely what I need to do and what's already implemented. Thanks for your speedy assistance. // Carl ------------------------------------------------------------------------- This SF.net email is sponsored by: Splunk Inc. Still grepping through log files to find problems? Stop. Now Search log events and configuration files using AJAX and a browser. Download your FREE copy of Splunk now >> http://get.splunk.com/ _______________________________________________ basedb-devel mailing list basedb-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/basedb-devel
