I have installed Base2 with PostgreSQL and am in the process of
testing things out. I have been able to add reporters, plates,
arrays, extracts hybridizations raw data and experiments. I am trying
to analyse an experiment so I chose new bioassay set, chose the
formulat fg mean - bg median and got the following error message.
I have two databases base2 and base2dynamic each has the same 5
schema (information_schema, pg_catalog, pg_toast, pg_temp_1, and
public) there is no schema named 'dynamic'.
Any suggestions?
Name
Run plugin: Formula intensity calculator
Description
Priority
5 (1 = highest, 10 = lowest)
Status
Error: ERROR: schema "dynamic" does not exist
BaseException: ERROR: schema "dynamic" does not exist
at HibernateUtil.createVirtualTable(HibernateUtil.java:553)
at VirtualDb.createTables(VirtualDb.java:239)
at PositionBatcher.buildPositionSql(PositionBatcher.java:264)
at PositionBatcher.insert(PositionBatcher.java:171)
at net.sf.basedb.util.IntensityCalculatorUtil.createRootBioAssaySet
(IntensityCalculatorUtil.java:336)
at net.sf.basedb.plugins.IntensityCalculatorPlugin.run
(IntensityCalculatorPlugin.java:216)
at PluginExecutionRequest.invoke(PluginExecutionRequest.java:83)
at InternalJobQueue$JobRunner.run(InternalJobQueue.java:447)
at java.lang.Thread.run(Thread.java:595)
Caused by: java.sql.SQLException: ERROR: schema "dynamic" does not exist
at org.postgresql.core.v3.QueryExecutorImpl.receiveErrorResponse
(QueryExecutorImpl.java:1471)
at org.postgresql.core.v3.QueryExecutorImpl.processResults
(QueryExecutorImpl.java:1256)
at org.postgresql.core.v3.QueryExecutorImpl.execute
(QueryExecutorImpl.java:175)
at org.postgresql.jdbc2.AbstractJdbc2Statement.execute
(AbstractJdbc2Statement.java:392)
at org.postgresql.jdbc2.AbstractJdbc2Statement.executeWithFlags
(AbstractJdbc2Statement.java:314)
at org.postgresql.jdbc2.AbstractJdbc2Statement.executeUpdate
(AbstractJdbc2Statement.java:264)
at com.mchange.v2.c3p0.impl.NewProxyStatement.executeUpdate
(NewProxyStatement.java:64)
at HibernateUtil.createVirtualTable(HibernateUtil.java:530)
... 8 more
Percent complete
100%
Created
2006-06-20 10:47
Started
2006-06-20 10:48
Ended
2006-06-20 10:48
Server
kpz6372
Plugin
Formula intensity calculator
Configuration
- none -
Properties
Parameters
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