Sorry, unfinished sentence ... Jari Häkkinen wrote: > Hi Steve, > > BASE 1.2 plug-ins can be made to run in BASE 2. I have not tried to get > a 1.2 plug-in to run in BASE 2 myself yet, but Johan Enell is doing the > major coding for the BASE 1 plug-in executer.
... Johan should be able to give some pointers. > TMEV is already in BASE 2.2 If you click the third icon in the bioassay > set view of an experiment you will initiate MeV. MeV is running as an > Java web start application, and the bioassay set is automatically loaded > at MeV start. You'll have to accept the certificate. You can perform > analysis in MeV but the results cannot (currently) be stored back to > BASE but saving to the local disk works. > > I forgot to add our customized version of MeV to BASE-hacks page. I'll > add the code to BASE-hacks. > > > Cheers, > > Jari > > > Steve Taylor wrote: >> Hi, >> >> Can anyone confirm if it is possible to run BASE 1.2 plugins reliably in >> BASE 2+? I noticed on the web site it says: >> >> "Plug-ins created for BASE 1.2 can be made to work in BASE 2 using the >> Base1PluginExecuter plug-in (this is still in development phase)." >> >> Also is TMEV planned to be integrated into BASE2? On >> >> http://base.thep.lu.se/chrome/site/doc/admin/plugin_configuration/coreplugins.html >> >> it says: >> >> "MeV is a versatile microarray data analysis tool, incorporating >> sophisticated algorithms for clustering, visualization, classification, >> statistical analysis and biological theme discovery, >> http://www.tm4.org. We use a modified version of MeV and provide information >> about the changes at http://trac.thep.lu.se/tracs/BASE-hacks."; >> >> but the link doesn't work. >> >> Thanks for any advice, >> >> Steve >> ------------------------------------------------------------------ >> Medical Sciences Division >> Weatherall Institute of Molecular Medicine/Sir William Dunn School >> Oxford University >> >> >> ------------------------------------------------------------------------- >> Take Surveys. Earn Cash. Influence the Future of IT >> Join SourceForge.net's Techsay panel and you'll get the chance to share your >> opinions on IT & business topics through brief surveys-and earn cash >> http://www.techsay.com/default.php?page=join.php&p=sourceforge&CID=DEVDEV >> _______________________________________________ >> The BASE general discussion mailing list >> basedb-users@lists.sourceforge.net >> unsubscribe: send a mail with subject "unsubscribe" to >> [EMAIL PROTECTED] >> > -- Jari Hakkinen, PhD Complex Systems Division mailto:[EMAIL PROTECTED] Department of Theoretical Physics phone: +46 (0)46 2229347 Lund University fax: +46 (0)46 2229686 Solvegatan 14a, SE-223 62 Lund, Sweden http://www.thep.lu.se ------------------------------------------------------------------------- Take Surveys. Earn Cash. Influence the Future of IT Join SourceForge.net's Techsay panel and you'll get the chance to share your opinions on IT & business topics through brief surveys-and earn cash http://www.techsay.com/default.php?page=join.php&p=sourceforge&CID=DEVDEV _______________________________________________ The BASE general discussion mailing list basedb-users@lists.sourceforge.net unsubscribe: send a mail with subject "unsubscribe" to [EMAIL PROTECTED]
