Nick Loman wrote:

It seems like the plugin is there. Check if this plugin has been shared 
to your user (Administrate->Plugins->Definitions and find the plugin). 
If not, only administrator/superuser can change that. If it is shared to 
you then it should be accessible.

Good luck,
Pawel

> Hi there
> 
> I wanted to use the Lowess Normalization plugin and couldn't see a way 
> of accessing it anywhere in the menus, so figured that the plugin may 
> need to be configured first.
> 
> As per your demo server, I tried to manually add the plugin via 
> Administrate -> Plugins -> Definitions.
> 
> I selected Install manually. In 'class' I put:
> 
> net.sf.basedb.plugins.LowessNormalization
> 
> I left the rest of the settings as default.
> 
> Unfortunately this gave me the following error:
> 
> Unexpected error
> DatabaseException on page /base2/admin/plugindefinitions/index.jsp
> Version       BASE 2.5.0 (build #4046; schema #46)
> Web server    Apache Tomcat/5.5
> Database Server       MySQL 5.0.45-Debian_1ubuntu3.1-log
> Database Dialect      org.hibernate.dialect.MySQLInnoDBDialect
> JDBC Driver   com.mysql.jdbc.Driver (version 5.0)
> Java runtime          Java(TM) 2 Runtime Environment, Standard Edition 
> (1.5.0_13-b05), Sun Microsystems Inc.
> Operating system      Linux i386 2.6.22-14-server
> 
> Error message         Duplicate entry 
> 'net.sf.basedb.plugins.LowessNormalization' for key 2
> 
> Stack trace   
> 
> DatabaseException
> ...at HibernateUtil.saveData(HibernateUtil.java:1031)
> ...at DbControl.commit(DbControl.java:381)
> ...at 
> org.apache.jsp.admin.plugindefinitions.index_jsp._jspService(index_jsp.java:360)
> ...at org.apache.jasper.runtime.HttpJspBase.service(HttpJspBase.java:98)
> ...at javax.servlet.http.HttpServlet.service(HttpServlet.java:802)
> ...at 
> org.apache.jasper.servlet.JspServletWrapper.service(JspServletWrapper.java:331)
> ...at 
> org.apache.jasper.servlet.JspServlet.serviceJspFile(JspServlet.java:329)
> ...at org.apache.jasper.servlet.JspServlet.service(JspServlet.java:265)
> 
> The message seems to be suggesting that I already have the plugin 
> configured, however, I cannot see this plugin in the list.
> 
> Any help appreciated
> 
> Nick.
> 
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-- 
Pawel Sztromwasser
Computational Biology Unit
Bergen Center for Computational Science

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