I have just found a small bug (and fix) related to this topic and added a new ticket:
http://base.thep.lu.se/ticket/938 Johan Enell writes: > I have added this as a ticket (http://base.thep.lu.se/ticket/671) and I > will take a closer look at it. > > /Johan > > > Chad Matsalla wrote: > > Greetings! > > > > I've discovered a problem with exporting BASEfiles. I discovered this while > > trying to run the BASE1PluginExecuter and unsurprisingly found the same > > problem when trying to export data from a BioassaySet. The problem is that > > the last row of data is absent from the export. > > > > Here's what I observered: > > > > 1. The Raw Bioassay has 31200 rows. When I go to the 'Raw Bioassay' page, > > 'Raw Data' page and 'Export' it I get all of the rows as a tab-delimited > > text file. Yay! > > > > 2. I go Experiments->Chad's Experiment->Bioassay Sets and click 'Export > > Data', select BASEfile and these parameters: > > Average on reporters: false > > Export as matrix or serial basefile: Serial Basefile > > Fields: Int ch1, Int ch2, position > > Reporter: Reporter ID, Reporter Name > > > > The last row I see exported has the position 31199. Row 31200 is absent. A > > blank line is at the end of this file. > > > > 3. Do everything the same as (2) but select 'Normal Basefile'. > > > > The last row I see exported has the position 31199. Row 31200 is absent. No > > blank line is at the end of this file. > > > > > > Thank you for your help, > > > > Chad Matsalla > > Plant Biotechnology Institute > > Saskatoon, Saskatchewan > > > > > > ------------------------------------------------------------------------- > > This SF.net email is sponsored by DB2 Express > > Download DB2 Express C - the FREE version of DB2 express and take > > control of your XML. No limits. Just data. Click to get it now. > > http://sourceforge.net/powerbar/db2/ > > _______________________________________________ > > The BASE general discussion mailing list > > basedb-users@lists.sourceforge.net > > unsubscribe: send a mail with subject "unsubscribe" to > > [EMAIL PROTECTED] > > > > ------------------------------------------------------------------------- > This SF.net email is sponsored by DB2 Express > Download DB2 Express C - the FREE version of DB2 express and take > control of your XML. No limits. Just data. Click to get it now. > http://sourceforge.net/powerbar/db2/ > _______________________________________________ > The BASE general discussion mailing list > basedb-users@lists.sourceforge.net > unsubscribe: send a mail with subject "unsubscribe" to > [EMAIL PROTECTED] -- Bob MacCallum | VectorBase Developer | Kafatos/Christophides Groups | Division of Cell and Molecular Biology | Imperial College London | Phone +442075941945 | Email [EMAIL PROTECTED] ------------------------------------------------------------------------- This SF.net email is sponsored by: Microsoft Defy all challenges. Microsoft(R) Visual Studio 2008. http://clk.atdmt.com/MRT/go/vse0120000070mrt/direct/01/ _______________________________________________ The BASE general discussion mailing list basedb-users@lists.sourceforge.net unsubscribe: send a mail with subject "unsubscribe" to [EMAIL PROTECTED]
