We are currently trying to integrate BASE into our lab and writing the 
necessary plug-ins to import normalized data from ImaGene. Let's just say that 
the lack of documentation has been "challenging".

Right now we are trying to figure out how to deal with duplicate spots. From 
the GenePix examples in the Base2 server we see cases of raw biosassays wtih 
[raw] columns defined by the unique spot coordinates as well as “rep‘ columns 
containing the duplicated GeneID classifiers. Any suggestions on how to do this?


André Nantel, M.Sc., Ph.D.
Senior Research Officer and Adjunct Professor
Project Manager, Microarray Lab

Biotechnology Research Institute
National Research Council of Canada
6100 Royalmount
Montreal, QC
Canada H4P 2R2

(514) 496-6370

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