The production team did consult with Avery Brooks, which is why he received the 
Thank You credit at the end.

https://winteriscoming.net/avery-brooks-more-involved-with-starfleet-academy-deep-space-nine-episode-than-you-think

> On Feb 10, 2026, at 12:43, Rick Moen via Basfa <[email protected]> wrote:
> 
> As I said during the meeting, I absolutely concur with Yochanan 
> in appreciating the most recent Star Trek: Starfleet Academy's
> story line about holographic (er, photonic) cadet "Sam" (technically 
> SAM, acronym for "Series Acclimation Mil") trying to solve the mystery
> of Commander Benjamin Sisko's ultimate fate (as shown in ST:DS9's
> two-part finale, "What You Leave Behind", that aired May 1999).
> 
> The current writers, 27 years down the pike, clearly meant well.
> It hit all the right notes -- except for that one jarring note they
> didn't realize they were hitting, the one that made me wince.
> 
> I'm about to rain on Yochanan's parade.  Sorry, chaver.
> 
> 
> Lead actor Avery Brooks, when he saw the script in 1999, came to
> scriptwriter/showrunner Ira Steven Behr and asked him to make one change
> he considered vital -- which request he granted, and established (and
> redefined) canon about Sisko, for a very good reason:
> 
> Brooks thought it would be very unfortunate to show his character Sisko
> _leaving_ his second wife Kasidy Yates, his son Jake, and his unborn
> second son, never to see them again -- even though (in the script) this
> was not his choice, but rather that of the god-like Bajoran Prophets,
> and even though that had always been Sisko's destiny since his birth
> getting covertly engineered by a Bajoran Prophet possessing a human
> woman back in New Orleans, so that Sisko could become the Prophets'
> Emissary.
> 
> Brooks felt that Sisko's wife and young son deserved better, and that a
> loving father, and moreover a Black role figure, _would come back_.  So,
> the writers added a scene where Sisko appears in a vision to Kasidy, to
> reassure her and Jake that he _would_ return.
> 
> Sisko:  "It’s hard to say. Maybe a year, maybe yesterday.  But I will be 
> back."
> Yates:  "And I will be waiting.”
> 
> At the time, this canonical offscreen reunion mattered to me, because
> I'd seen the other outcome, when a brave widow being told by two solemn
> Pan Am officials, early on the cold morning of Dec. 26, 1968, that her
> husband and father of her two children would never return from his final
> flight, the doomed Flight 799.  I always felt she deserved better.  Her
> name was Faye W. Moen.  I knew this brave widow and role model for 53
> years, and her husband Captain Arthur Moen for 10.
> 
> The ST:SA writers just broke Paramount's important, meaningful promise
> to now-retired actor Mr. Avery Brooks, and changed Trek canon -- very
> unfortunately -- unless one's headcanon arranges to have it both ways,
> by assuming Benjamin Lafayette Sisko _did_ return to Kasidy and Jake,
> about 800 years before the ST:SA timeline, but chose to never tell
> either Starfleet or Sam.
> 
> It is unfortunate that the writers messed up -- but there's only so much
> faithfulness to narrative (or to solemn promises) one can expect after
> almost 3 decades.
> 
> Further to that:  You might have assumed, given the use of an Avery
> Brooks voiceover in his very distinctive baritone, that the retired Mr.
> Brooks gave his blessing to this change of his character's story, by
> recording that voiceover for them:  "Devine laws are simpler than human
> ones, which is why it takes a lifetime to be able to understand them.
> Only love can understand them.  Only love can interpret these words, as
> they were meant to be interpreted."  This was followed by a screen
> showing "Thank you, Avery."
> 
> Unfortunately for this interpretation, the showrunners borrowed that
> audio clip from an unrelated recording Mr. Brooks made decades ago, for
> some other purpose.  It is highly unlikely he was even asked about its
> recent reuse.
> 
> Brooks is a private man, but I read that he married in 1976, raised
> three kids with his one and only wife, and never left.  A faithful man,
> a role model, a university professor at Rutgers.  I don't know if the
> rest of us deserve him, but his family and students do.
> https://web.archive.org/web/20160806103100/http://www.deseretnews.com/article/66065/AVERY-BROOKS-IS-JUST-AS-COOL-AND-IMPOSING-IN-PERSON.html
> 
> 
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