In response to Dimitry I ran the following in Terminal

Neills-MacBook-Pro:~ neillsmith$ ls -la /VCTTools

ls: /VCTTools: No such file or directory

Neills-MacBook-Pro:~ neillsmith$ xattr /VCTTools

xattr: No such file: /VCTTools

Did I do this correctly?

Neill
On Sunday, June 27, 2021 at 12:36:17 PM UTC-4 Neill Smith wrote:

> Further information. I suspect you all are correct about a security file 
> system problem.
>
> As I noted earlier, the BBEdit script HydroV_dbg.scpt  is invoked from 
> within BBEdit from a GEO file. The BBEdit SCPT file in turn invokes the 
> AppleScript file hdbgsub.sh. This script file runs a compiled program 
> HydroV that reads the GEO file and outputs a slew of files that are then 
> used by other compiled programs.
>
> The reason for executing the GEO file from within BBEdit is to make sure 
> it is correct. Part of the BBEdit SCPT file opens the OUT file produced by 
> HydroV so that it can be checked.
>
> Once a GEO file is correct, a number of Matlab programs use it. These 
> Matlab codes directly run the AppleScript file hdbgsub.sh with the GEO file 
> as the input. Other programs are then run under Matlab from the output 
> files that are created by running the GEO file.
>
> Now the Matlab file that runs the AppleScript SH file hdbgsub.sh directly 
> is called rung.m
> This file works under either the Mac OS or the Win OS. A piece of the code 
> from rungeo.m is shown below.
>
> if ismac
>
>     slash = '/';
>
>     root = 'bash ';
>
>     ext = '.sh';
>
> else
>
>     slash = '\';
>
>     root = 'C:';
>
>     ext = '';
>
> end
>
> [Hstat Hmsg] = 
> system([root,slash,'VCTTools',slash,'bat',slash,'hdbgsub',ext,' 
> ',filename]);
>
>
> Basically, this snippet either calls  hdbgsub.sh or  hdbgsub.bat depending 
> on the OS.
>
> This is a long winded way to get to my new info.
>
> I directly ran rungeo.m so that it would go directly to hdbgsub.sh. I got 
> the following message.
>
> bash: /VCTTools/bat/hsub.sh: No such file or directory
>
> If I try to CD from my test directory to /VCTTools directly I get
>
> K>> cd
>
> /Users/neillsmith/NSS_Office/Veh/Low_Re_Tests
>
> K>> cd /VCTTools
> Error using cd
> Cannot CD to /VCTTools (Name is nonexistent or not a directory).
>
> So in Finder I can get to /VCTTools and edit files. BBEdit can open files 
> under /VCTTools and edit them.
> But other programs don't see this directory /VCTTools.
>
> So what is the best fix that doesn't involve a lot of path edits and break 
> the simple SVN update process?
>
> I really appreciate all of your help.
>
> Neill
> On Sunday, June 27, 2021 at 10:58:45 AM UTC-4 Neill Smith wrote:
>
>> In reply to Rich, I executed a Terminal command that I found online 
>> yesterday to get back to bash. The response that I got was "No changes" so 
>> I don't know if I am running bash or not. How do I tell?
>>
>> Will respond to other responses later. Gotta go get sick wife breakfast.
>>
>> Thanks,
>>
>> Neill
>>
>> On Sunday, June 27, 2021 at 10:34:51 AM UTC-4 Neill Smith wrote:
>>
>>> I need to learn to proof better. I have read & write permissions on all 
>>> files and folders.
>>>
>>> On Sunday, June 27, 2021 at 9:46:56 AM UTC-4 Neill Smith wrote:
>>>
>>>> In response to Kreme earlier. I checked the permissions on\VCTTools 
>>>> using Get Info. I have had & write permissions. Everyone else has read 
>>>> permissions. The same permissions hold for the SH file hdbgsub.sh.
>>>>
>>>> Is there some other way to check permissions other than Get Info?
>>>>
>>>> On Sunday, June 27, 2021 at 9:38:16 AM UTC-4 Neill Smith wrote:
>>>>
>>>>>
>>>>> Yes it does exist.  I can open that file (and any other SH file) in 
>>>>> AppleScript and edit it. I can open it directly using BBEdit but of 
>>>>> course 
>>>>> it looks like garbage.
>>>>>
>>>>> This particular setup is from when my former company used Windows. On 
>>>>> a WinPC having VCTTools at c:\VCTTools on every computer meant anyone 
>>>>> could 
>>>>> add a new tool (VCTTools was maintained in a SVN repository) to VCTTools 
>>>>> and then everyone could just update their VCTTools copy. No one had to 
>>>>> edit 
>>>>> paths for their computer.
>>>>>
>>>>> When we moved to MacOS, VCTTools was placed at the ROOT LEVEL to get 
>>>>> the same effect. Files within VCTTools have paths set under this 
>>>>> assumption. If VCTTools were a folder under a USER under MacOS, any one 
>>>>> updating to the newest version would have to go in and edit paths in a 
>>>>> bunch of files.
>>>>> On Sunday, June 27, 2021 at 7:47:55 AM UTC-4 Ulrich Kapp wrote:
>>>>>
>>>>>> Hi Neill,
>>>>>>
>>>>>> Did you check whether the script file /VCTTools/bat/hdbgsub.sh does 
>>>>>> exist?
>>>>>>
>>>>>> Ulrich
>>>>>>
>>>>>> Am 27.06.2021 um 01:10 schrieb Neill Smith <[email protected]>:
>>>>>>
>>>>>> I recently upgraded  my macOS from High Sierra to Big Sur. A script 
>>>>>> file that has run for years under BBEdit (and TextWrangler before) has 
>>>>>> quit 
>>>>>> working. The script is invoked from within a file [fname].GEO by picking 
>>>>>> the script from my scripts list in the BBEdit top bar. The script runs a 
>>>>>> program that reads the [fname].GEO file.
>>>>>>
>>>>>> Now the script doesn't run. I get the message
>>>>>>
>>>>>> A scripting error has occurred:
>>>>>>
>>>>>> sh: /VCTTools/bat/hdbgsub.sh: No such file or directory
>>>>>>
>>>>>> This directory does exist. I uninstalled BBEdit and did a clean 
>>>>>> reinstall. I had to contact BBEdit tech support in order to install the 
>>>>>> Command Line Tools because old versions of the tools had to be removed 
>>>>>> manually.
>>>>>>
>>>>>> I didn't write the original script. It was created by a colleague 
>>>>>> years ago. BBEdit tech support recommended that I contact this group.
>>>>>>
>>>>>> Thanks,
>>>>>>
>>>>>> Neill Smith
>>>>>>
>>>>>> -- 
>>>>>> This is the BBEdit Talk public discussion group. If you have a 
>>>>>> feature request or need technical support, please email "
>>>>>> [email protected]" rather than posting here. Follow @bbedit on 
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>>>>>>  
>>>>>> <https://groups.google.com/d/msgid/bbedit/a8fc6e58-41f0-4ea1-9180-efea41378b86n%40googlegroups.com?utm_medium=email&utm_source=footer>
>>>>>> .
>>>>>>
>>>>>>
>>>>>>

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