Oct. 22, 2008
Courtesy American Institute of Physics
and World Science staff

Biology is chock full of art. For decades, scientists have probed some of
the tiniest structures of life's bas ic build ing molecular blocks, such as
DNA or pro teins, rendering full-color ball-and-stick models of them that
fill the pages of jour nals and adorn the trophy cases of biology depart
ments eve ry where.

While these representations reveal some of the most intricate molecular
details of life, they of ten fall short in depicting how a molecule moves.

Just as the perfect picture of a horse can not convey the fluidity of it
gallop, so does a frozen pic ture of DNA fail in describing its intricate
dance.

"These are wet, warm, squishy things," said Adam Cohen of Harvard
University. They jiggle, they flap, they twist, they turn, and they randomly
"walk" about.

Studying how a single molecule moves is hard, how ever, because of these
very motions. Like a horse, if you set a single molecule free, it will
wander away. You can tie it down, ensuring that it no longer wanders, but
then you can't necessarily observe how it moves.

Now, thanks to a machine built by Cohen and colleagues at Harvard, it may be
possible to con fine a single molecule and study its motions at the same
time. Cohen presented his findings this week in Boston at the annual
symposium and exhibition of the American Vacuum Society, a part of the
American Institute of Physics.

The machine basically uses a variable electric field to trap a single
molecule under a microscope, Cohen said. It does this by tracking the
molecule's motion and then rapidly applying tiny electric pulses to counter
this motion and zap the molcule back in to place. Cohen described how he and
his colleagues can use this machine to look at things like virus particles
or single pieces of DNA.

Cohen reported that his group recently made a movie by capturing 60,000
high-speed frames of a DNA molecule dancing. The studies show the nature of
the molecule's internal forces, said Co hen, and these properties give in
formation about how DNA interacts in a biological setting.

* * *rt. For dec ades, sci en tists have probed some of the ti ni est struc
tures of life's bas ic build ing
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