Hi,
this is just to briefly inform you that a new package called MMDiff is
now available.
It's a statistical testing method specifically designed to compare
ChIP-Seq data sets. It takes advantage of higher order features to
detect shape changes in ChIP-Seq peaks and should also be applicable
to other -Seq methods, like DNase-Seq. Biological replicates are used
to estimate biological variance. Any comments highly appreciated.
Many thanks,
Gabriele Schweikert
-------
Dr Gabriele Schweikert
Marie Curie Postdoctoral Research Fellow
School of Informatics,
Wellcome Trust Centre for Cell Biology
University of Edinburgh,
Edinburgh EH8 9AB, UK
--
The University of Edinburgh is a charitable body, registered in
Scotland, with registration number SC005336.
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