It is very common to want to order a GenomicRanges by *position* but not strand. Would be nice to have an ignore.strand argument for ordering GenomicRanges. I realize that this is not possible by the order generic. But it would be possible for sort().
I also realize that someone could do this: gr2 <- gr strand(gr2) <- "*" gr[order(gr2)] But that is long-winded. Perhaps there could be an unstrand()? gr[order(unstrand(gr))] But this is still better: sort(gr, ignore.strand=TRUE) Sound like a good thing? Michael [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel