Hi everyone, We are pleased to announce that we have added a new function called keepStandardChromosomes() to GenomicRanges(1.15.18) - devel branch.
This function allows a user to subset a given object (containing a seqinfo class) to retain only the primary chromosomes and the autosomes. Please feel free to get back if you face any issues. Thanks, Sonali Arora. On 12/16/2013 11:01 AM, Michael Lawrence wrote: > Awesome, thanks, Sonali. And welcome to the team. > > Michael > > > On Mon, Dec 16, 2013 at 10:38 AM, Arora, Sonali <sar...@fhcrc.org > <mailto:sar...@fhcrc.org>> wrote: > > Hi Michael, > > That is an extremely interesting question. We have a couple of > ideas and are beginning to work on it. > We hope to come up with something soon. > > Thanks, > Sonali. > > > On 12/16/2013 6:14 AM, Michael Lawrence wrote: > > should be stored with the Seqinfo. It could be imputed > (along with the isCircular I think) via th > > > _______________________________________________ > Bioc-devel@r-project.org <mailto:Bioc-devel@r-project.org> mailing > list > https://stat.ethz.ch/mailman/listinfo/bioc-devel > > [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
