Hi,
With the latest bioc-devel, the convertion of XStringSets within a
DataFrame to a data.frame behaves strangely:
library(Biostrings)
dss = DNAStringSet(c("ACT", "AAA"))
DF = DataFrame(dss)
as(DF, "data.frame")
In the latest bioc-devel, this splits the strings:
dss.group dss.group_name dss.value
1 1 <NA> A
2 1 <NA> C
3 1 <NA> T
4 2 <NA> A
5 2 <NA> A
6 2 <NA> A
In older versions of bioc-devel (e.g. from last week) and bioc-stable,
this keeps the structure and converts to strings to factor levels:
dss
1 ACT
2 AAA
Any idea what is causing this?
Best wishes
Julian
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