On 01/16/2015 03:00 PM, Dario Strbenac wrote:
Thank you for the detailed explanation. I understand the cause now. Actually, 
the exact problem is that, in runTest, I have a condition that depends on the 
previous function calls :

  if(any(grepl("runTests", deparse(sys.calls()))))

If runTest was called by runTests, then I intend to return a particular value 
that does not refer to the variable datasetName. If runTest was called directly 
by the user, such as when they have one training and on test dataset and don't 
need to do the cross-validation offered by runTests, I intend to return a 
ClassifyResult object, which does refer to the variable datasetName. The 
condition evaluates to FALSE, even when runTest was called by runTests on 
Windows, and executes the unintended code block which makes reference to 
datasetName, which is missing. How can I make my check of previously called 
functions platform-independent when I am also using parallelisation ?


I'd just be more direct about signalling what you want runTest to do, by adding an extra argument

fun <- function(..., .init=FALSE)
    ## document .init as 'internal' argument not for end users
{
    if (.init)
        return("done")
    message("doing")
    fun(..., .init=TRUE)
}

If you'd like to keep .init from user view, then implement the above as .fun, and provide an end-user wrapper

fun <- function(...) .fun(..., .init=FALSE)

Martin

--------------------------------------
Dario Strbenac
PhD Student
University of Sydney
Camperdown NSW 2050
Australia
_______________________________________________
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel



--
Computational Biology / Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N.
PO Box 19024 Seattle, WA 98109

Location: Arnold Building M1 B861
Phone: (206) 667-2793

_______________________________________________
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel

Reply via email to