> -----Original Message----- > From: Bioc-devel [mailto:bioc-devel-boun...@r-project.org] On Behalf Of > Michael Lawrence > Sent: Friday, October 16, 2015 7:56 AM > To: bioc-devel@r-project.org > Subject: [Bioc-devel] ideas for ScanBamParam filters > > Maybe I just missed these, but these are a couple of things we could filter > by, in addition to what's there already: > > - Minimum MAPQ > - Read group
see tagFilter and mapqFilter args to ScanBamParam. I don't know how heavily used these are so bugs welcome. Martin > > The first is mostly for convenience, but the second should also benefit > performance. > > I can help implement this, but wanted to make sure this is a reasonable > approach. > > Michael > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
