On 01/13/2016 07:28 PM, Hervé Pagès wrote:
Hi Ben, Martin,

On 01/13/2016 08:19 AM, Morgan, Martin wrote:
[...]
So this is a bug in S4Vectors, but fixed in Bioc-devel where new
package development should be occurring.

I'll leave it to Herve or others to decide whether S4Vectors in
release should be patched.

Michael fixed this in devel. Thanks Michael!

I was told off-list that Jim Hester fixed this in devel. True:

pages@latitude:~/svn/bioconductor/Rpacks/S4Vectors$ svn log -r 109840
------------------------------------------------------------------------
r109840 | j.hester | 2015-10-22 09:56:54 -0700 (Thu, 22 Oct 2015) | 2 lines

Use fully qualified names for IRanges::PartitioningByEnd

------------------------------------------------------------------------

Sorry for that. You've got to give the right credit to the right
people. So thanks Jim! But also thanks Michael for many other fixes
to S4Vectors!

H.

--
Hervé Pagès

Program in Computational Biology
Division of Public Health Sciences
Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N, M1-B514
P.O. Box 19024
Seattle, WA 98109-1024

E-mail: hpa...@fredhutch.org
Phone:  (206) 667-5791
Fax:    (206) 667-1319

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