There is discussion at
http://stackoverflow.com/questions/23556205/using-boost-regex-with-rcpp
pointing to
http://gallery.rcpp.org/articles/boost-regular-expressions/
There is a Bioconductor example in that bundles the regex library at
flowCore/src/
https://github.com/Bioconductor-mirror/flowCore
A second example is in the mzR package.
A real question is, do you really need this functionality at the C level?
A secondary question is that if several packages are using this functionality,
then perhaps the library could be bundled separately and made available just
once; zlibbioc does something like this (sort of; zlib is only needed on
Windows). The flowCore and mzR maintainers (cc'd) might be a valuable resource
in this regard.
Martin
________________________________________
From: Bioc-devel <bioc-devel-boun...@r-project.org> on behalf of Jiří Hon
<xhonj...@stud.fit.vutbr.cz>
Sent: Monday, January 25, 2016 4:33 AM
To: Charles Determan
Cc: bioc-devel@r-project.org
Subject: Re: [Bioc-devel] C library or C package API for regular expressions
Hi Charles,
thank you a lot for your helpful hint. There is still a thing that I'm
not sure about - Boost manual says that Boost.Regex is not header only
[1]. So as BH package contains only headers, I will have to bundle the
Boost.Regex library into the package code anyway. Am I right?
Jiri
[1]
http://www.boost.org/doc/libs/1_60_0/more/getting_started/unix-variants.html#header-only-libraries
Dne 23.1.2016 v 13:35 Charles Determan napsal(a):
> Hi Jiri,
>
> I believe you can use the BH package. It contains most of the Boost
headers.
>
> Regards,
> Charles
>
> On Saturday, January 23, 2016, Jiří Hon <xhonj...@stud.fit.vutbr.cz>
wrote:
>
>> Dear package developers,
>>
>> I would like to ask you for advice. Please, what is the most seamless
>> way to use regular expressions in C/C++ code of R/Bioconductor package?
>> Is it allowed to bundle some C/C++ library for that (like PCRE or
>> Boost.Regex)? Or is there existing C API of some package I can depend on
>> and import?
>>
>> Thank you a lot for your attention and please have a nice day :)
>>
>> Jiri Hon
>>
>> _______________________________________________
>> Bioc-devel@r-project.org mailing list
>> https://stat.ethz.ch/mailman/listinfo/bioc-devel
>>
>
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