So it turns out there is not going to be a build report for windows in devel today, for an unrelated reason. But it should be ok in tomorrow's build.
Dan ----- Original Message ----- > From: "Samuel E Zimmerman" <sezim...@einstein.yu.edu> > To: "Dan Tenenbaum" <dtene...@fredhutch.org> > Cc: "bioc-devel" <bioc-devel@r-project.org> > Sent: Wednesday, January 27, 2016 10:14:55 AM > Subject: RE: [Bioc-devel] package passes R CMD BUILD on Linux (Ubuntu) but > not Windows Server 2008 > Great. Thank you for the quick reply and solution! > > Sam > ________________________________________ > From: Dan Tenenbaum [dtene...@fredhutch.org] > Sent: Wednesday, January 27, 2016 11:43 AM > To: Samuel E Zimmerman > Cc: bioc-devel > Subject: Re: [Bioc-devel] package passes R CMD BUILD on Linux (Ubuntu) but not > Windows Server 2008 > > ----- Original Message ----- >> From: "Samuel E Zimmerman" <sezim...@einstein.yu.edu> >> To: "bioc-devel" <bioc-devel@r-project.org> >> Sent: Wednesday, January 27, 2016 8:35:24 AM >> Subject: [Bioc-devel] package passes R CMD BUILD on Linux (Ubuntu) but not >> Windows Server 2008 > >> Hi Everyone, >> >> When I uploaded my package to Bioconductor it passed all tests for the Linux >> OS, >> but failed on the Windows Server. The error is below. >> >> >> Warning: running command '"c:\MikTex2.9\miktex\bin\texify.exe" --quiet --pdf >> "pathVar.tex" --max-iterations=20 -I >> "E:/biocbld/bbs-3.3-bioc/R/share/texmf/tex/latex" -I >> "E:/biocbld/bbs-3.3-bioc/R/share/texmf/bibtex/bst"' had status 1 >> Error in find_vignette_product(name, by = "texi2pdf", engine = engine) : >> Failed to locate the 'texi2pdf' output file (by engine 'utils::Sweave') for >> vignette with name 'pathVar'. The following files exist in directory '.': >> 'outline_fig_2.pdf', 'pathVar-2SamDisc_1.pdf', 'pathVar-dens_1.pdf', >> 'pathVar-diagnostics.pdf', 'pathVar-hist_1.pdf', 'pathVar.Rnw', >> 'pathVar.tex' >> Calls: <Anonymous> -> find_vignette_product >> Execution halted >> >> Also, here is a link to the build report. Does anyone know why this is >> happening? When I build it locally on my mac, the vignette is made and >> building >> the package is completed without any errors. >> >> http://bioconductor.org/checkResults/3.3/bioc-LATEST/pathVar/moscato2-buildsrc.html >> > > This is a known issue that has been reported to R-devel. It is also very > difficult to reproduce because it only happens once in a while. I just built > your package successfully on moscato2, and in fact in the build report that is > coming out later today it also built successfully. > So all you have to do is wait. ;) > > Dan > > >> Best, >> Sam >> >> >> [[alternative HTML version deleted]] >> >> _______________________________________________ >> Bioc-devel@r-project.org mailing list > > https://stat.ethz.ch/mailman/listinfo/bioc-devel _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
