Thanks Stephen and Dan, sorry I haven't chased this down recently. I have access to a Mac and will look into it now.
-Mike On Mon, Feb 1, 2016 at 1:45 PM, Dan Tenenbaum <dtene...@fredhutch.org> wrote: > Actually, it does seem like there is a more complicated issue going on. I > will investigate and report back here. > > Thanks, > Dan > > > ----- Original Message ----- > > From: "Dan Tenenbaum" <dtene...@fredhutch.org> > > To: "Hartley, Stephen (NIH/NHGRI) [F]" <stephen.hart...@nih.gov> > > Cc: "bioc-devel" <bioc-devel@r-project.org> > > Sent: Monday, February 1, 2016 10:11:54 AM > > Subject: Re: [Bioc-devel] TIMEOUTs on Morelia > > > I think the morelia server was overloaded, so it was restarted yesterday > around > > 11PM Seattle time, so I hope we will see fewer TIMEOUTs in today's build > > report. > > Dan > > > > > > ----- Original Message ----- > >> From: "Hartley, Stephen (NIH/NHGRI) [F]" <stephen.hart...@nih.gov> > >> To: "bioc-devel" <bioc-devel@r-project.org> > >> Sent: Monday, February 1, 2016 10:06:11 AM > >> Subject: [Bioc-devel] TIMEOUTs on Morelia > > > >> The current devel build for DESeq2 has status TIMEOUT on Morelia. This > is odd > >> since the package builder gives it 40 minutes to complete, and it > finishes in > >> less than 5 on zin2 and muscato2. > >> > >> A bunch of packages that depend on or suggest DESeq2 also timeout on > Morelia: > >> DiffBind, derfinder, DChIPRep, gage, phyloseq, rgsepd, systemPipeR, and > TCC. > >> All of them time out after 40 minutes, but take less than 10 minutes to > build > >> on zin2 and moscato2. > >> > >> So I guess the question is: is it DESeq2, or is something wrong with > the Morelia > >> server? I don't have an OSX-mavericks machine to test it all out on. > >> > >> Is there any way to get previous daily build reports, or are they > deleted daily? > >> > >> -Steve > >> > >> [[alternative HTML version deleted]] > >> > >> _______________________________________________ > >> Bioc-devel@r-project.org mailing list > >> https://stat.ethz.ch/mailman/listinfo/bioc-devel > > > > _______________________________________________ > > Bioc-devel@r-project.org mailing list > > https://stat.ethz.ch/mailman/listinfo/bioc-devel > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel > [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel