Actually it looks like the version of java installed on morelia is 1.6. So it appears that 1.7 (or higher) needs to be installed.
Dan ----- Original Message ----- > From: "Zach Charlop-Powers" <zach.charlop.pow...@gmail.com> > To: "Nan Xiao" <road2s...@gmail.com> > Cc: "bioc-devel" <bioc-devel@r-project.org> > Sent: Monday, December 5, 2016 1:02:52 PM > Subject: Re: [Bioc-devel] Dependency update propagation (rcdk on morelia) > Hi Nan, > > rCDK 3.3.6 requires Java8 and will throw error if the Java environment is > incorrect. BioC Build only has Java7 hence the error. The new version of > rCDK requires Java7. Once rcdk 3.3.8 makes it onto the BioC builds (its on > CRAN), these errors should clear up. Please keep me posted if they don't. > > zach cp > > On Mon, Dec 5, 2016 at 3:43 PM, Nan Xiao <road2s...@gmail.com> wrote: > >> Hey guys, >> >> - it seems this problem is also affecting the other two Bioc packages >> depending on rcdk, i.e. RMassBank and rcellminer (release + devel). Any >> ideas why? >> >> Thanks, >> -Nan >> >> On Fri, Dec 2, 2016 at 2:29 PM, Nan Xiao <road2s...@gmail.com> wrote: >> >>> Hi Bioc, >>> >>> - the Rcpi package depends on rcdk, and the rcdk package was updated last >>> week from 3.3.6 to 3.3.8 on CRAN thanks to Zach's (cc'd) work, which >>> removed the Java > 1.8 requirement (previously discussed in >>> https://stat.ethz.ch/pipermail/bioc-devel/2016-October/009881.html ). >>> >>> I've updated the Rcpi package and specified the rcdk version to be >= >>> 3.3.8, while the most recent Mac build gives the error: ( >>> http://bioconductor.org/checkResults/release/bioc-LATEST/ >>> Rcpi/morelia-buildsrc.html ) >>> >>> namespace 'rcdk' 3.3.6 is being loaded, but >= 3.3.8 is required. >>> >>> So it seems morelia is still using rcdk 3.3.6, while this >= 3.3.8 >>> version requirement is fulfilled by Linux and Windows builds (if I >>> understand correctly). >>> >>> Is there anything I could do to solve this issue? >>> >>> Thanks a lot, >>> -Nan >>> >>> -- >>> http://nanx.me >>> >> >> >> >> -- >> http://nanx.me >> > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel