Good day, Now I know about invertStrand, I agree that it's best to keep the strandMode only for paired-end data. Indeed, it's an example at the end of the lengthy documentation of GAlignments.
-------------------------------------- Dario Strbenac University of Sydney Camperdown NSW 2050 Australia _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel