On 03/20/2017 02:31 PM, Dan Tenenbaum wrote:
As I recall, there were issues building RCytoscape (and packages that depend on
it) on Mac and Windows. Mostly because this requires a running instance of
Cytoscape for each platform (and double that for release + devel). That used
too much infrastructure so we disabled building on those platforms. However,
since RCytoscape contains no native (C/C++/Fortran) code, it will still be
available on all platforms and should install just fine.
As long as the same is true of categoryCompare then Mac/Windows users should be
able to use it.
Exactly. Thanks Dan & Jim!
FWIW, supported platforms are controlled via the .BBSoptions file.
I added this file in August last year:
hpages@latitude:~/svn/bioconductor/Rpacks/categoryCompare$ svn log -v
-r120632
------------------------------------------------------------------------
r120632 | hpa...@fhcrc.org | 2016-08-31 17:13:55 -0700 (Wed, 31 Aug
2016) | 1 line
Changed paths:
A /trunk/madman/Rpacks/categoryCompare/.BBSoptions
mark as unsupported on non-linux like RCytoscape which
categoryCompare depends on
------------------------------------------------------------------------
Cheers,
H.
Dan
----- Original Message -----
From: "James W. MacDonald" <jmac...@uw.edu>
To: "Robert M. Flight" <rfligh...@gmail.com>
Cc: "bioc-devel" <bioc-devel@r-project.org>
Sent: Monday, March 20, 2017 2:22:36 PM
Subject: Re: [Bioc-devel] Package not being built on Windows or Mac
It's probably because you depend on RCytoscape, which isn't supported on
Windows or MacOS. And maybe this has something to do with XMLRPC?
Jim
On Mon, Mar 20, 2017 at 4:59 PM, Robert M. Flight <rfligh...@gmail.com>
wrote:
As per the exhortation to check the build status on Devel prior to next
version of Bioconductor release, I just noticed that my package
categoryCompare has a "not supported" on Windows and Mac.
Looking at release history, this seems to I have changed at Bioc v 3.4,
and I'm curious why that would be the case.
Regards,
Robert
Robert M Flight, PhD
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