Hi Roel,
It looks like Michael fixed rtracklayer yesterday and that
MutationalPatterns 1.2.1 could finally propagate:
http://bioconductor.org/checkResults/release/bioc-LATEST/MutationalPatterns/malbec2-buildsrc.html
The landing page should get updated soon:
http://bioconductor.org/packages/MutationalPatterns
Cheers,
H.
On 05/19/2017 06:34 AM, Janssen-10, R.R.E. wrote:
Dear Valerie,
Could we maybe do a manual build for the package, so that the bugfixed version
can be propagated to users?
Kind regards,
Roel Janssen
________________________________________
From: Bioc-devel [bioc-devel-boun...@r-project.org] on behalf of Janssen-10,
R.R.E. [r.r.e.janssen...@umcutrecht.nl]
Sent: Monday, May 15, 2017 3:06 PM
To: Michael Lawrence; bioc-devel@r-project.org
Subject: Re: [Bioc-devel] Build problem with malbec2
Dear Michael,
Do you have any indication on when we can expect the fix?
This is currently keeping Linux users from getting our latest bugfixed version.
Kind regards,
Roel Janssen
________________________________________
From: Bioc-devel [bioc-devel-boun...@r-project.org] on behalf of Janssen-10,
R.R.E. [r.r.e.janssen...@umcutrecht.nl]
Sent: Wednesday, May 10, 2017 3:33 PM
To: Obenchain, Valerie; bioc-devel@r-project.org
Cc: Michael Lawrence
Subject: Re: [Bioc-devel] Build problem with malbec2
Dear Valerie,
Ok. And thanks Michael, for working on a fix.
Kind regards,
Roel Janssen
From: Obenchain, Valerie [valerie.obench...@roswellpark.org]
Hi Roel,
Looks like the problem is in rtracklayer (also red on the release build
report). I think Michael is aware of this and a fix will be coming soon.
Valerie
On 05/10/2017 02:23 AM, Janssen-10, R.R.E. wrote:
Dear Bioconductorians,
Is there something wrong with malbec2, or is there something broken in our
package?
See the build report:
https://urldefense.proofpoint.com/v2/url?u=http-3A__bioconductor.org_checkResults_release_bioc-2DLATEST_MutationalPatterns_malbec2-2Dbuildsrc.html&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=MyZsFQqdxhaBUOBrVJIhg41VpaZSbAcH1igpYP6eqtk&s=aZyiKKAhTq_cai7kxgmnhwn_NsQVyH5Zj4r-lFsMngA&e=
Kind regards,
Roel Janssen
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