Thanks guys, while neither suggestion worked since the problem was deeper than I thought, your suggestions helped me understand the problem was the local .git files and in the end I was able (I think) to push a revision of ALDEx2 up to the devel branch Greg > On May 25, 2017, at 6:51 PM, Sean Davis <seand...@gmail.com> wrote: > > > > On Thu, May 25, 2017 at 6:31 PM, Martin Morgan > <martin.mor...@roswellpark.org> wrote: > On 05/25/2017 05:29 PM, Greg Gloor wrote: > I have a question about updating my package using the git-svn approach. I am > on Mac El Capitan. I am using the git svn from git version 2.10.1 as > installed on the system (not home-brew, since this won't work for some > reason) and have updated the update_remotes.sh script to point to the this > git version. with this git svn works fine > > This script ran fine earlier, but I had to remove and re-clone the > repository. Now when I run the shell script I get the error: > > fatal: remote bioc already exists > > I searched the archive and did not see anything like this for the current > git-svn approach > > Y'all are always so secretive about your packages... > > Maybe you've already run the script? Probably you can edit the plain text > file .git/config in your repository to remove the section that looks > something like > > [remote "bioc"] > url = https://github.com/Bioconductor-mirror/BiocFileCache.git > fetch = +refs/heads/*:refs/remotes/bioc/* > > Or "git remote rm bioc", which will remove the "bioc" remote, accomplishing > the same thing as editing the .git/config file. > > Sean > > > > good luck! > > Martin > > > Suggestions? > > Thank you > > Greg Gloor > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel > > > > This email message may contain legally privileged and/or...{{dropped:2}} > > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel > > > > -- > Sean Davis, MD, PhD > Center for Cancer Research > National Cancer Institute > National Institutes of Health > Bethesda, MD 20892 > https://seandavi.github.io/ > https://twitter.com/seandavis12
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