Hello, The coverage function is still inconvenient to use with a vector of weights to convert a GRanges metadata column into a RleList object.
"The coverage method for GRanges could gain a default value argument." - Michael Lawrence, January 2013. "Something like coverage(foo, bar, ..., NA.value=-1)?" - Tim Triche, Jr., January 2013. Might this plan be restored (with a default value of 0 for backwards compatibility)? -------------------------------------- Dario Strbenac University of Sydney Camperdown NSW 2050 Australia _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
