On 08/22/2017 06:07 AM, Joris Meys wrote:
As said, this is what I got after
git fetch upstream
As per instructions here:
http://bioconductor.org/developers/how-to/git/maintain-github-bioc/ (I
did carry out the previous steps as well).
I guess I'm looking for more information, for instance you don't mention
what package you're working with! The svn user formerly known as j.meys
is associated with packages/unifiedWMWqPCR, and with the public key
starting with
ssh-rsa AAAAB3NzaC1yc2EAAAADAQABAAABAQCoPGY+EOzCkrmxQ6CJS9r4PH...
maybe you could confirm that the remote you've added is correct by reporting
git remote -a
and that you can check out the repository directly
cd /tmp
git clone g...@git.bioconductor.org:packages/unifiedWMWqPCR
to confirm that the ssh key exchange is working correctly.
A possible problem is that you have several ssh keys on your machine,
and git is using the wrong one. On linux (what operating system are you
on?) one could edit ~/.ssh/config to contain an entry like
Host git.bioconductor.org
IdentityFile ~/.ssh/id_rsa_corresponding_to_submitted_key.pub
In a bash shell you can see the ssh exchange with
GIT_SSH_COMMAND="ssh -v" git pull
which toward the top might indicate where it fails to find the correct
ssh key.
You can also use the form https://goo.gl/forms/97Cf3zFgyQwG76lw1 to
submit additional ssh keys (1 per request); these requests are processed
'by hand' so involve a lag of about 24 hours.
Martin
Cheers
Joris
On Tue, Aug 22, 2017 at 11:24 AM, Martin Morgan
<martin.mor...@roswellpark.org <mailto:martin.mor...@roswellpark.org>>
wrote:
On 08/22/2017 04:59 AM, Joris Meys wrote:
Hi,
I sent my public key as registered in my github account to you a
while ago,
but when I tried to clone my repository, I get the following
error message
after git fetch upstream:
-----
The authenticity of host 'git.bioconductor.org
<http://git.bioconductor.org> (34.192.48.227)' can't be
established.
ECDSA key fingerprint is
SHA256:nXILc5fVCnDfOID8HgPi+mSufGtr2JMYgnRa1JAQj/Q.
Are you sure you want to continue connecting (yes/no)? yes
Warning: Permanently added 'git.bioconductor.org
<http://git.bioconductor.org>,34.192.48.227' (ECDSA) to
the list of known hosts.
Permission denied (publickey).
fatal: Could not read from remote repository.
Please make sure you have the correct access rights and the
repository
exists.
-----
I've been googling and hurting my brain to figure out what I did
wrong, but
I honestly don't have a clue. Can anyone tell me how I can solve
this?
can you show the command that you are using to (try to) clone your
repository?
Cheers
Joris
This email message may contain legally privileged and/or
confidential information. If you are not the intended recipient(s),
or the employee or agent responsible for the delivery of this
message to the intended recipient(s), you are hereby notified that
any disclosure, copying, distribution, or use of this email message
is prohibited. If you have received this message in error, please
notify the sender immediately by e-mail and delete this email
message from your computer. Thank you.
--
Joris Meys
Statistical consultant
Ghent University
Faculty of Bioscience Engineering
Department of Mathematical Modelling, Statistics and Bio-Informatics
tel : +32 9 264 59 87
joris.m...@ugent.be
-------------------------------
Disclaimer : http://helpdesk.ugent.be/e-maildisclaimer.php
This email message may contain legally privileged and/or...{{dropped:2}}
_______________________________________________
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel
