Dear Lori,

I have revised the description file, and push both changes to github and 
upstream git/bioconductor.

I hope this will fix the following errors in dev 3.9. The previous errors in 
3.8 malbec and merida platform related to version C++, I have revise the 
makevar file to specify the C++11.

I hope that is also corrected.


Thank you for you advice, please email me if the errors remain.



Irene SL Zeng

From: Shepherd, Lori <lori.sheph...@roswellpark.org>
Sent: Saturday, 17 November 2018 3:49 a.m.
To: Irene Zeng
Subject: [FORGED] failing Bioconductor package mlm4omics


Dear mlm4omics maintainer,

I'd like to bring to your attention that the mlm4omics package is failing on 
all platforms in the devel version of Bioconductor (3.9)


http://bioconductor.org/checkResults/devel/bioc-LATEST/mlm4omics/

Would you mind taking a look at this? Don't hesitate to ask on the 
bioc-devel@r-project.org mailing list if you have any question or need help.


While devel is a place to experiment with new features, we expect packages to 
build and check cleanly in a reasonable time period and not stay broken for any 
extended period of time.   The package has been failing since 11/06/18

If no action is taken over the next few weeks we will begin the deprecation 
process for your package.

It appears on your Nov 4 commit  you introduced a bad DESCRIPTION file -  you 
accidentally committed a conflict

Package: mlm4omics
<<<<<<< HEAD
Version: 0.99.23
=======
Version: 1.1.0
>>>>>>> upstream/master
Title: Multilevel Model for Multivariate Responses with Missing Values


Please fix this asap

Thank you for your time and effort, and your continued contribution to 
Bioconductor.

Pleae be advised that Bioconductor has switched from svn to Git. Some helpful 
links can be found here:
https://bioconductor.org/developers/how-to/git/
http://bioconductor.org/developers/how-to/git/bug-fix-in-release-and-devel/




Lori Shepherd

Bioconductor Core Team

Roswell Park Cancer Institute

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

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