This is probably best asked on the issue itself so your reviewer can chime in and keep track of changes.
It is the length of time to run the entire check that is the check time not just the examples so that is also something to keep in mind. We would first recommend evaluating any datasets you are using. Are you using full sets? Can it be pared down to a smaller subset to decrease run time? Often a full dataset isn't needed to show functionality. I recommend further comments be asked on the submission thread itself. Cheers Lori Shepherd Bioconductor Core Team Roswell Park Cancer Institute Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 ________________________________ From: Bioc-devel <bioc-devel-boun...@r-project.org> on behalf of Kevin Wang <kevin.w...@sydney.edu.au> Sent: Tuesday, February 26, 2019 8:44:30 PM To: bioc-devel@r-project.org Subject: [Bioc-devel] R CMD check takes too long Hi, I have submitted my package scMerge to Bioconductor�s GitHub Issue page. The only warning that I am receiving now tells me the R CMD check took more than 5 minutes. I am not sure how can I shorten this time as a number of the checks are taking much longer time than my local computers. Even on the BioC build report, the example for the function scMerge takes 5.6 seconds on Linux, 8 seconds on OS X, and 75 seconds on Windows. http://bioconductor.org/spb_reports/scMerge_buildreport_20190226202635.html Any help would be appreciated Best Wishes Kevin Kevin Y.X. WANG | PhD Candidate Postgraduate Teaching Fellow Faculty of Science, School of Mathematics and Statistics THE UNIVERSITY OF SYDNEY Carslaw Building (F07) | The University of Sydney | NSW | Australia | 2006 T +61 2 9114 1276 | M +61 404 955 255 E kevin.w...@sydney.edu.au<mailto:k.w...@maths.usyd.edu.au> | W https://kevinwang09.github.io/<http://www.maths.usyd.edu.au/ut/people?who=KY_Wang> CRICOS 00026A This email plus any attachments to it are confidential. Any unauthorised use is strictly prohibited. If you receive this email in error, please delete it and any attachments. Please think of our environment and only print this e-mail if necessary. [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. [[alternative HTML version deleted]]
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