Okay, thank you very much! On Fri, 12 Apr 2019 at 12:25, Shepherd, Lori <lori.sheph...@roswellpark.org> wrote:
> That is not correct. The webhook was only for the package submission > process. > > See the link provided on linking to Bioconductor. > > Other helpful github links can be found here: > http://bioconductor.org/developers/how-to/git/ > > > > > > Lori Shepherd > > Bioconductor Core Team > > Roswell Park Cancer Institute > > Department of Biostatistics & Bioinformatics > > Elm & Carlton Streets > > Buffalo, New York 14263 > ------------------------------ > *From:* Alina Selega <alina.sel...@gmail.com> > *Sent:* Friday, April 12, 2019 12:22:40 PM > *To:* Shepherd, Lori > *Cc:* bioc-devel > *Subject:* Re: [Bioc-devel] New build report > > Thank you for the instructions! > > Can I just clarify -- I was pushing changes to my Github repository that > has a webhook set up (as per instructions from when I first submitted the > package to Bioconductor). I thought that pushes to master branch with > version bump should trigger package builds. Am I wrong about this? > > Thanks, > Alina > > On Fri, 12 Apr 2019 at 12:15, Shepherd, Lori < > lori.sheph...@roswellpark.org> wrote: > > We are not seeing the changes pushed to the git.bioconductor server. I am > assuming you are referring to the RELEASE_3_8 branch since you are > referencing 1.6.1. > > > Have set up the remote upstream to point to Bioconductor, > > http://bioconductor.org/developers/how-to/git/sync-existing-repositories/ > > > On your repository you can check your remotes with > git remote -v > > It should include something like the following: > upstream g...@git.bioconductor.org:packages/BUMHMM.git (fetch) > upstream g...@git.bioconductor.org:packages/BUMHMM.git (push) > > Make sure you pushed to the upstream remote: > > > http://bioconductor.org/developers/how-to/git/bug-fix-in-release-and-devel/ > > and that you are working on the RELEASE_3_8 branch > > git fetch --all > > git checkout RELEASE_3_8 (or git checkout upstream RELEASE_3_8) > > # make your changes > > # commit your changes > > # push the changes to Bioconductor with the following: > > git push upstream RELEASE_3_8 > > > > > Lori Shepherd > > Bioconductor Core Team > > Roswell Park Cancer Institute > > Department of Biostatistics & Bioinformatics > > Elm & Carlton Streets > > Buffalo, New York 14263 > ------------------------------ > *From:* Bioc-devel <bioc-devel-boun...@r-project.org> on behalf of Alina > Selega <alina.sel...@gmail.com> > *Sent:* Friday, April 12, 2019 12:04:03 PM > *To:* bioc-devel > *Subject:* Re: [Bioc-devel] New build report > > Hi, > > Sorry, I think I must have done something wrong as the build report is not > showing the updates to my package from 2 days ago. Could you please help me > with this? I thought I updated the version of BUMHMM correctly (from 1.6.1 > to 1.6.2 and 1.6.3) but it is not been picked up? > > Thanks, > Alina > > On Thu, 11 Apr 2019 at 12:47, Alina Selega <alina.sel...@gmail.com> wrote: > > > Hi, > > > > I have made some minor updates to my package (BUMHMM) yesterday to fix > the > > warnings arising on the Windows server and pushed the changes with a > > version bump from its current version 1.6.1. (actually, two bumps.) > > > > I don't see any changes in today's build report; has the build happened > > yet? > > > > Thanks, > > Alina > > > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel > > This email message may contain legally privileged and/or confidential > information. If you are not the intended recipient(s), or the employee or > agent responsible for the delivery of this message to the intended > recipient(s), you are hereby notified that any disclosure, copying, > distribution, or use of this email message is prohibited. If you have > received this message in error, please notify the sender immediately by > e-mail and delete this email message from your computer. Thank you. > > > This email message may contain legally privileged and/or confidential > information. If you are not the intended recipient(s), or the employee or > agent responsible for the delivery of this message to the intended > recipient(s), you are hereby notified that any disclosure, copying, > distribution, or use of this email message is prohibited. If you have > received this message in error, please notify the sender immediately by > e-mail and delete this email message from your computer. Thank you. [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
