I can reproduce the error using R-3.6.0beta and running the following two steps to replicate the Bioc builder commands:
R CMD build --keep-empty-dirs --no-resave-data Rdisop rm -rf Rdisop.buildbin-libdir && mkdir Rdisop.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Rdisop.buildbin-libdir Rdisop_1.43.4.tar.gz Bit of a guess, and I don't know why this would have changed, but the Rdisop_1.43.4.tar.gz produced by step one contains the *.o files referenced in the error. If these were produced for 64-bit architecture then they'll fail when the build process tries to use them for the 32-bit binary. Perhaps your Rcpp edits removed some cleanup code that was there before? I note there's no Makevars.win or cleanup.win but my memory is a bit fuzzy on whether only versions with *.win will be run on Windows or if that's just a way to provide alternative code if needed. On Thu, 18 Apr 2019 at 11:35, Neumann, Steffen <sneum...@ipb-halle.de> wrote: > Hi, > > with the next release coming up, I am out of wits regarding the failure at > > http://bioconductor.org/checkResults/devel/bioc-LATEST/Rdisop/tokay2-buildbin.html > which exists since before April this year, when we committed > some changes to get rid of the RcppClassic dependency. > > Max Helf succeeded to build locally on windows without problem. > > So it seems that Rdisop has issues with the BioC windows build > environment, but I totally fail to see the reason. > > Could it be the new staged installation ? > But I wouldn't know why that'd affect the compile/linking. > > The issue is tracked at > https://github.com/sneumann/Rdisop/issues/13 > > Any help/pointers appreciated. > > Yours, > Steffen > > -- > > IPB Halle AG Massenspektrometrie & Bioinformatik > Dr. Steffen Neumann http://www.IPB-Halle.DE > Weinberg 3 Tel. +49 (0) 345 5582 - 1470 > 06120 Halle +49 (0) 345 5582 - 0 > sneumann(at)IPB-Halle.DE Fax. +49 (0) 345 5582 - 1409 > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel > [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel