Hi, From the Linux command line:
git clone https://github.com/BaderLab/netDx R CMD INSTALL netDx * installing to library ‘/home/hpages/R/R-3.6.r76454/library’ Error: error reading file '/home/hpages/sandbox/netDx/DESCRIPTION' R CMD build netDx * checking for file ‘netDx/DESCRIPTION’ ...Error : file '/home/hpages/sandbox/netDx/DESCRIPTION' is not in valid DCF format EXISTS but not correct format From R: library(devtools) remotes::install_github("BaderLab/netDx") # Error in read.dcf(path) : # Line starting 'The method converts ...' is malformed! How about making sure that your package is valid before submitting? H. On 6/14/19 15:14, Shraddha Pai wrote: > Hello BioC dev community, > > I just submitted a package to BioC. > > 1) The automatic build gave it an "ABNORMAL" status with the following > error " Accessing git_info complete. get_dcf_info failed; could not open." > https://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_Bioconductor_Contributions_issues_1149&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=e_D_8tgOJqRWkkntG6nT-DmtuDokbY-IAwP1G1LMyy0&s=OawuiEO9WE4oRyy8UOG-HzZ1XNKaDXntzuCSGADpetA&e= > I've Googled a bit and cannot find the solution for what this error means > and how to address it. Can someone please help me? > > 2) The package above was an AdditionalPackage to a companion dataset. The > first build on the initial dataset package resulted in an error. I address > the error and pushed a git commit 2-3 hours ago, but haven't seen a second > build attempt in response to that push. How often are builds triggered? > Obviously it would be great to do a series of builds and fix errors in a > short span of time. > > 3) Also how can I search the bioc-devel mailing list? > I only see this archive page: > https://urldefense.proofpoint.com/v2/url?u=https-3A__stat.ethz.ch_pipermail_bioc-2Ddevel_&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=e_D_8tgOJqRWkkntG6nT-DmtuDokbY-IAwP1G1LMyy0&s=sibCeuRBHi9h8oxdW9Wh6HJcxADJ7XxRY7CdSDhXgI4&e= > My apologies if these are trivial questions. > > Thanks very much, > Shraddha > -- Hervé Pagès Program in Computational Biology Division of Public Health Sciences Fred Hutchinson Cancer Research Center 1100 Fairview Ave. N, M1-B514 P.O. Box 19024 Seattle, WA 98109-1024 E-mail: [email protected] Phone: (206) 667-5791 Fax: (206) 667-1319 _______________________________________________ [email protected] mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
