Hi Henrik, On 12/3/19 09:13, Henrik Bengtsson wrote: > I'm interested in finding out what customization Bioconductor servers > do to R CMD check, e.g. _R_CHECK_***_ settings. I think someone > pointed me to some location in the past, but I cannot locate it.
The settings on the Linux/Mac builders are: https://github.com/Bioconductor/BBS/blob/master/3.11/R_env_vars.sh and on the Windows builder they are: https://github.com/Bioconductor/BBS/blob/master/3.11/R_env_vars.bat We just moved those settings to their own files yesterday (good timing) to make it easier to re-use them for the devel docker image (see https://github.com/Bioconductor/bioconductor_full/pull/20#issuecomment-560546981). > I > think a natural place to document those would be on the 'Node Info' > pages together with the existing platform and compiler information, > e.g. > https://urldefense.proofpoint.com/v2/url?u=http-3A__bioconductor.org_checkResults_devel_bioc-2DLATEST_malbec2-2DNodeInfo.html&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=vTnT-DDbyP899v1VHljMc9jEcFqcbhXe6Dk3aTtU_YA&s=AFrilsJa2FP3Gk7trNjD2KuWa0WegOBq6ig8SHl0-sI&e= > . Exactly. That's the plan. Cheers, H. > > Thanks, > > Henrik > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://urldefense.proofpoint.com/v2/url?u=https-3A__stat.ethz.ch_mailman_listinfo_bioc-2Ddevel&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=vTnT-DDbyP899v1VHljMc9jEcFqcbhXe6Dk3aTtU_YA&s=Cc5slvLV6zlwGr9LwvWDwH44Dc5_zv-CoLF6Q83l9bE&e= > -- Hervé Pagès Program in Computational Biology Division of Public Health Sciences Fred Hutchinson Cancer Research Center 1100 Fairview Ave. N, M1-B514 P.O. Box 19024 Seattle, WA 98109-1024 E-mail: hpa...@fredhutch.org Phone: (206) 667-5791 Fax: (206) 667-1319 _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel