Hi all, A package I maintain on Bioconductor ('phemd') has failed R CMD check on two of three of the Bioconductor builders (tokay1 and malbec1) with the following error message:
Error in py_module_import(module, convert = convert) : ImportError: No module named phate It looks like this package (or one of its dependent packages) has an unstated dependence on a standard package. All dependencies must be declared in DESCRIPTION. See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. * checking whether the package can be unloaded cleanly ... WARNING ---- unloading * checking whether the namespace can be loaded with stated dependencies ... WARNING Error in py_module_import(module, convert = convert) : ImportError: No module named phate A namespace must be able to be loaded with just the base namespace loaded: otherwise if the namespace gets loaded by a saved object, the session will be unable to start. I have been told that the 'phate' python module is unable to be installed on tokay1 which uses Python2 (phate requires Python3) but that it has been installed on the malbec1 builder such that the error should not be occuring on that build. I have tried without avail to fix this / search for a solution online (including the 'Writing R Extensions' manual). Any recommendations on how to address this issue? Link to build: https://master.bioconductor.org/checkResults/3.10/bioc-LATEST/phemd/ Thanks! Will ᐧ [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel