Hi Herve, I definitely didn't look into the right place. I was waiting for an email about my package build report. Thank you so much for pointing this out.
Regards, Quy -----Original Message----- From: Hervé Pagès <hpa...@fredhutch.org> Sent: Wednesday, April 29, 2020 11:44 AM To: Cao, Quy <quy....@umconnect.umt.edu>; Shepherd, Lori <lori.sheph...@roswellpark.org>; Nitesh Turaga <nturaga.b...@gmail.com>; Bioc-devel <bioc-devel@r-project.org> Subject: Re: [Bioc-devel] No build report Hi Quy, Are you looking at the right place? Build report for BioC 3.11 is here https://bioconductor.org/checkResults/3.11/bioc-LATEST/ and I see PERFect there, since at least Monday. Best, H. On 4/29/20 08:01, Cao, Quy wrote: > Dear Lori, > > I haven't seen a build report for the package yet. Should I be waiting for a > little bit more? > > Thanks, > > Quy > > From: Shepherd, Lori <lori.sheph...@roswellpark.org> > Sent: Monday, April 27, 2020 11:00 AM > To: Cao, Quy <quy....@umconnect.umt.edu>; Nitesh Turaga > <nturaga.b...@gmail.com>; Bioc-devel <bioc-devel@r-project.org> > Subject: Re: No build report > > It looks like you had merge conflicts with the version bump to 1.1.1 until > late Sat night: > > commit 199ad444e10c81c472deefe5dff5e32dff977b41 > Author: Quy Xuan Cao <quy....@umontana.edu<mailto:quy....@umontana.edu>> > Date: Sat Apr 25 23:33:03 2020 -0400 > > Bump up to version 1.1.1 on github > > > This would be too late to be picked up on Sunday's build report but should be > reflected in today's (normally posted sometime between 3-5PM EST). If it > isn't reflected in today's report, We (the core team) are doing the freeze > and bump and branch for the RELEASE_3_11 and it should resolve itself after > that. > > Cheers, > > > > Lori Shepherd > > Bioconductor Core Team > > Roswell Park Comprehensive Cancer Center > > Department of Biostatistics & Bioinformatics > > Elm & Carlton Streets > > Buffalo, New York 14263 > > ________________________________ > From: Bioc-devel > <bioc-devel-boun...@r-project.org<mailto:bioc-devel-bounces@r-project. > org>> on behalf of Cao, Quy > <quy....@umconnect.umt.edu<mailto:quy....@umconnect.umt.edu>> > Sent: Monday, April 27, 2020 10:15 AM > To: Nitesh Turaga > <nturaga.b...@gmail.com<mailto:nturaga.b...@gmail.com>>; Bioc-devel > <bioc-devel@r-project.org<mailto:bioc-devel@r-project.org>> > Subject: [Bioc-devel] No build report > > Dear all, > > I have pushed my updated package PERFect to Bioconductor last weekend but I > haven't seen any build report yet. Is there something I can do in this > situation? > > Thanks, > > Quy > > -----Original Message----- > From: Bioc-devel > <bioc-devel-boun...@r-project.org<mailto:bioc-devel-bounces@r-project. > org>> On Behalf Of Nitesh Turaga > Sent: Monday, April 27, 2020 9:00 AM > To: Leonardo Collado Torres > <lcollado...@gmail.com<mailto:lcollado...@gmail.com>>; Bioc-devel > <bioc-devel@r-project.org<mailto:bioc-devel@r-project.org>> > Cc: Carmina Barberena Jonas > <car.bar...@gmail.com<mailto:car.bar...@gmail.com>> > Subject: Re: [Bioc-devel] regutools: request to add more git push > access > > Hi Leo, > > I've added you and Alejandro to the regutools package. > > Carmina and Emiliano, please confirm the email addresses you'll be using. I > can add you both as well, and create BiocCredentials accounts for you. > > > Nitesh > > On 4/26/2020 11:42 PM, Leonardo Collado Torres wrote: >> Hi Nitesh, >> >> Could you add me (l.collado-torres) and Alejandro Reyes (what's your >> svn username Alejandro?) to regutools' list of contributors that have >> git push access? I think this is what we are supposed to do from >> re-reading >> https://urldefense.proofpoint.com/v2/url?u=https-3A__secure-2Dweb.cisco.com_1ss3pRMDsJo76mWIsyzXe9lDXoItH2sFabu1CE0znVtuQca1EmsAJSreHomRLs6G6xn-5FgOm6dFEx0dX7CnDzGwE4-5FuklxxTxCsGVOB-5FKCeo13s4UraPVR7afmm8-5FrnmkVrEWTGiTb3jvNrN-5FQDpXBQaMnWw2ymPtot2vNWY5mQp3d5vGiB0NhIRQnxoz7znJB70m6qEvbzJu1oIbjW5EkXrqiXt8ED0uwY1-2Db-5FL9vGSG6xw1MD3dFa2e6DuqHVr1fhCs4SFAGup5Ih2Ns9dFNEsoptDSjsEznRqTC8DIP4FHujFuZGPlFEcQXq37L-5FuE3-5FFlIEFSaT4zaqdX3r-5FcPnQ_https-253A-252F-252Fgithub.com-252FBioconductor-252FContributions-252Fissues-252F1393-2523issuecomment-2D597202057&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=8FW13IFEzMh6ofnZWE-pQBRqriZB_wUdNPOJFK6VqjQ&s=HWm6YBMuhNa8NWPpCStnczlVUMxptH24b7uGVReCzzg&e= >> . >> >> Carmina & Emiliano might want git push access too, but they do not >> have BioC git accounts as far as I know. >> >> Anyway, for now, I just wanted to add two commits already on GitHub >> and push them to BioC's git repo following >> https://urldefense.proofpoint.com/v2/url?u=http-3A__secure-2Dweb.cisc >> o.com_1cFasDB-5Fkkp19Ri6C4NTgSGk39cBX-5FQF8Xn6DTqLzEL0ijtRrKn9gGLKXPG >> MHF0rrpS7AHZXUEHFchYfU-2Di08pRgke3QTkgyYR60jav1vUCef7Y-5FhfWdJr6A5Eoe >> SXiE3GAXDGelk7GufWzF-2DPMrSGMVZIR19bEGVB2jmYRSCDg-5FY3Bx2mhfjHjvOTuf8 >> LldH6lSBbyW8MTvNOy9n9Ilybk5z-2DjUdXNyixRmRmuioLC0jmip-2D-5F8jinrjB1qP >> yFmIVPsy-5FvCLy-5FyPiZMsrsgK7TqeETN4FLwh0W0ey1uMCUDDrqdSgpLcdyxmKWXuv >> t6ZPa7PjgeUFJfPT-2Du8RRYzHgEcJ4K0T5K2GXZqmlChCMOo_http-253A-252F-252F >> bioconductor.org-252Fdevelopers-252Fhow-2Dto-252Fgit-252Fsync-2Dexist >> ing-2Drepositori&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGb >> WY_wJYbW0WYiZvSXAJJKaaPhzWA&m=8FW13IFEzMh6ofnZWE-pQBRqriZB_wUdNPOJFK6 >> VqjQ&s=u2sFG4IufIt1g6tu-QFushAuaLvtlWi73NU-s-mAuhY&e= >> es/ >> before BioC 3.11's freeze. >> >> Thanks, >> Leo >> >> _______________________________________________ >> Bioc-devel@r-project.org<mailto:Bioc-devel@r-project.org> mailing >> list >> https://urldefense.proofpoint.com/v2/url?u=https-3A__secure-2Dweb.cis >> co.com_1FPy1mLnCRO4TAB6gES9DdpTKRi0nfju4Jo8fdrpIXLGRb6TToHLD-5FSrdXWM >> kprVgbO8wD0WP8jv0AMFq3SwEhj5qefE3vKBK6ty-5FSrnB38W89nw16Qnwpdl6rJJ-5F >> j-2DkAc-2DIBG15lXpt9ZGMltamh6dSEhN8kr74OiP2Eu8YkHa6qtt5KrH9mEAo8qqiKf >> rKunI9YBghKaNGwhpf1WnhkUwYwt3EI75Q98sMy91lhyEd1KtF5HUTY-5F-2Dj2JBCugv >> hu4i2Ugx4B5578ISwRLAtUwpdIFGfuznPilVZmV-2D1BuTqkq8CfwNkks5x3obLruDxTJ >> 0RjI4Nd6HbAu1Q7mT-2D3EQ_https-253A-252F-252Fstat.ethz.ch-252Fmailman- >> 252Flistinfo-252Fbioc-2Ddevel&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7 >> q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=8FW13IFEzMh6ofnZWE-pQBRqri >> ZB_wUdNPOJFK6VqjQ&s=uG0mjXnc-KjPS9oEny8nCbqcjIiF_-ttDi77eDjOcIQ&e= > > _______________________________________________ > Bioc-devel@r-project.org<mailto:Bioc-devel@r-project.org> mailing list > https://urldefense.proofpoint.com/v2/url?u=https-3A__secure-2Dweb.cisc > o.com_1FPy1mLnCRO4TAB6gES9DdpTKRi0nfju4Jo8fdrpIXLGRb6TToHLD-5FSrdXWMkp > rVgbO8wD0WP8jv0AMFq3SwEhj5qefE3vKBK6ty-5FSrnB38W89nw16Qnwpdl6rJJ-5Fj-2 > DkAc-2DIBG15lXpt9ZGMltamh6dSEhN8kr74OiP2Eu8YkHa6qtt5KrH9mEAo8qqiKfrKun > I9YBghKaNGwhpf1WnhkUwYwt3EI75Q98sMy91lhyEd1KtF5HUTY-5F-2Dj2JBCugvhu4i2 > Ugx4B5578ISwRLAtUwpdIFGfuznPilVZmV-2D1BuTqkq8CfwNkks5x3obLruDxTJ0RjI4N > d6HbAu1Q7mT-2D3EQ_https-253A-252F-252Fstat.ethz.ch-252Fmailman-252Flis > tinfo-252Fbioc-2Ddevel&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvim > eWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=8FW13IFEzMh6ofnZWE-pQBRqriZB_wUdNPO > JFK6VqjQ&s=uG0mjXnc-KjPS9oEny8nCbqcjIiF_-ttDi77eDjOcIQ&e= > > _______________________________________________ > Bioc-devel@r-project.org<mailto:Bioc-devel@r-project.org> mailing list > https://urldefense.proofpoint.com/v2/url?u=https-3A__secure-2Dweb.cisc > o.com_1FPy1mLnCRO4TAB6gES9DdpTKRi0nfju4Jo8fdrpIXLGRb6TToHLD-5FSrdXWMkp > rVgbO8wD0WP8jv0AMFq3SwEhj5qefE3vKBK6ty-5FSrnB38W89nw16Qnwpdl6rJJ-5Fj-2 > DkAc-2DIBG15lXpt9ZGMltamh6dSEhN8kr74OiP2Eu8YkHa6qtt5KrH9mEAo8qqiKfrKun > I9YBghKaNGwhpf1WnhkUwYwt3EI75Q98sMy91lhyEd1KtF5HUTY-5F-2Dj2JBCugvhu4i2 > Ugx4B5578ISwRLAtUwpdIFGfuznPilVZmV-2D1BuTqkq8CfwNkks5x3obLruDxTJ0RjI4N > d6HbAu1Q7mT-2D3EQ_https-253A-252F-252Fstat.ethz.ch-252Fmailman-252Flis > tinfo-252Fbioc-2Ddevel&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvim > eWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=8FW13IFEzMh6ofnZWE-pQBRqriZB_wUdNPO > JFK6VqjQ&s=uG0mjXnc-KjPS9oEny8nCbqcjIiF_-ttDi77eDjOcIQ&e= > > This email message may contain legally privileged and/or confidential > information. If you are not the intended recipient(s), or the employee or > agent responsible for the delivery of this message to the intended > recipient(s), you are hereby notified that any disclosure, copying, > distribution, or use of this email message is prohibited. If you have > received this message in error, please notify the sender immediately by > e-mail and delete this email message from your computer. Thank you. > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://urldefense.proofpoint.com/v2/url?u=https-3A__stat.ethz.ch_mail > man_listinfo_bioc-2Ddevel&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeA > vimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=8FW13IFEzMh6ofnZWE-pQBRqriZB_wUd > NPOJFK6VqjQ&s=E-6YLbSDBVvhQMqPB9FHupxl3Qa9py6-rYgGkE9Tmvk&e= > -- Hervé Pagès Program in Computational Biology Division of Public Health Sciences Fred Hutchinson Cancer Research Center 1100 Fairview Ave. N, M1-B514 P.O. 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