Hi Chris and Benjamin,

I’m trying to set things in order so that access is resumed back to normal for 
the 7 packages

It seems that there are multiple email address listed for Benjamin --  
‘benjamin.haibe.ka...@utoronto.ca’ and 'bhklab.resea...@gmail.com’.  Can we 
default to only one email address? 'benjamin.haibe.ka...@utoronto.ca’ is 
registered as maintainer on the packages, so choosing this email as the default 
would be easiest for me to fix. But I’ll leave the choice to you.

And I’ve created a new BiocCredentials account for Chris, so that there is no 
crossover of accounts. I’ll share these credentials with Chris in a private 
email. 

Both Chris and Benjamin will have maintainer access to the packages in 
question. 

Best,

Nitesh 




> On Jun 3, 2020, at 1:27 PM, Nitesh Turaga <nturaga.b...@gmail.com> wrote:
> 
> Hi Chris,
> 
> Thanks for that list. I’ll give you and Benjamin access all those packages. 
> That is what you need right? 
> 
> I’ll contact you when it’s done. Don’t do anything from your end just yet.
> 
> Best,
> 
> Nitesh 
> 
>> On Jun 3, 2020, at 1:26 PM, Chris Eeles <christopher.ee...@outlook.com 
>> <mailto:christopher.ee...@outlook.com>> wrote:
>> 
>> Hi Nitesh,
>> 
>> I did not change the username on purpose, maybe it happened because I 
>> submitted CoreGx under my GitHub account with Benjamin listed as the 
>> maintainer?
>> 
>> Anyway, all of our package on Bioconductor are:
>> genefu
>> PharmacoGx
>> predictionnet
>> survcomp
>> Xeva
>> consensusOV
>> CoreGx
>>  
>> Benjamin’s GitHub username is bhaibeka, if I just change the username back 
>> will that work?
>> 
>> Sorry for an inconvenience.
>>  
>> Best,
>> Chris
>>  
>> From: Nitesh Turaga <nturaga.b...@gmail.com <mailto:nturaga.b...@gmail.com>> 
>> Sent: June 3, 2020 1:15 PM
>> To: Chris Eeles <christopher.ee...@outlook.com 
>> <mailto:christopher.ee...@outlook.com>>
>> Cc: bioc-devel@r-project.org <mailto:bioc-devel@r-project.org>; Haibe-Kains, 
>> Benjamin <benjamin.haibe-ka...@uhnresearch.ca 
>> <mailto:benjamin.haibe-ka...@uhnresearch.ca>>
>> Subject: Re: [Bioc-devel] SSH Issues
>>  
>> Hi Chris,
>>  
>> I just checked and it seems you have changed the username in Benjamin’s 
>> account. Is that correct? 
>>  
>> So, the mapping is lost for all the packages Benjamin had, and your username 
>> as well has lost all of it’s mapping on Git repo. 
>>  
>> Can you tell me what packages you need access to? We should keep Benjamin’s 
>> account at his ‘utoronto.ca 
>> <https://nam11.safelinks.protection.outlook.com/?url=http%3A%2F%2Futoronto.ca%2F&data=02%7C01%7C%7C27cb7946457d4b13907108d807e1a694%7C84df9e7fe9f640afb435aaaaaaaaaaaa%7C1%7C0%7C637268013222071484&sdata=oy5bAg2L8ZyLGTYEhLoVRV0iH8Oto3iCnTtsdVEEZR4%3D&reserved=0>’
>>  separate from yours. 
>>  
>> I’ll create an account for you and give you access. I’ll have to fix 
>> benjamin’s account and yours as well/
>>  
>> Best,
>>  
>> Nitesh 
>>  
>> 
>> 
>> On Jun 3, 2020, at 12:56 PM, Chris Eeles <christopher.ee...@outlook.com 
>> <mailto:christopher.ee...@outlook.com>> wrote:
>>  
>> Hi Nitesh,
>> 
>> I had a look at the packages I have access to and it seems that the 
>> Bioconductor credentials account I logged into only has access to the Xeva 
>> repo. I am using ‘benjamin.haibe.ka...@utoronto.ca 
>> <mailto:benjamin.haibe.ka...@utoronto.ca>', the email listed as maintainer 
>> for all of the BHKLAB Bioconductor submissions.
>> 
>> 
>> Which email would the credentials be managed if not the maintainers’?
>> 
>> I tried activating an account using my GitHub email but it says I am not the 
>> maintainer of any packages.
>> 
>> Are you able to see which email the credentials for PharmacoGx and CoreGx 
>> are managed under? If not how can I manage access to these repos?
>> 
>> Thanks for your support.
>> 
>> Best,
>> Chris
>>  
>> From: Nitesh Turaga <nturaga.b...@gmail.com <mailto:nturaga.b...@gmail.com>> 
>> Sent: June 3, 2020 11:05 AM
>> To: Chris Eeles <christopher.ee...@outlook.com 
>> <mailto:christopher.ee...@outlook.com>>
>> Cc: Bioc-devel@r-project.org <mailto:Bioc-devel@r-project.org>
>> Subject: Re: [Bioc-devel] SSH Issues
>>  
>> Hi Chris,
>>  
>> http://bioconductor.org/developers/how-to/git/faq/ 
>> <https://nam11.safelinks.protection.outlook.com/?url=http%3A%2F%2Fbioconductor.org%2Fdevelopers%2Fhow-to%2Fgit%2Ffaq%2F&data=02%7C01%7C%7C27cb7946457d4b13907108d807e1a694%7C84df9e7fe9f640afb435aaaaaaaaaaaa%7C1%7C0%7C637268013222071484&sdata=A7Zxee0BmsukYqKMoaueyryPUre%2F4j6yqZW4ermkaNo%3D&reserved=0>
>>  Take a look at #13 and #14. 
>>  
>> I’ll be able to better help you with more information.
>>  
>> Best,
>>  
>> Nitesh 
>> 
>> 
>> 
>> On Jun 3, 2020, at 10:49 AM, Chris Eeles <christopher.ee...@outlook.com 
>> <mailto:christopher.ee...@outlook.com>> wrote:
>>  
>> Hello Bioconductor team,
>> 
>> I am having issues pushing updates to the development branch of the CoreGx 
>> package.
>> 
>> When I try to push to upstream I get:
>> "FATAL: W any packages/CoreGx gangeshberiuhn DENIED by fallthru
>> (or you mis-spelled the reponame)
>> Fatal: Could not read from remote repository.
>> 
>> Please make sure you have the correct access rights
>> on the repository and the repository exists."
>> 
>> I have access to our Bioconductor credentials account and have confirmed 
>> that my public key is registered there, so I am not sure what is going on. I 
>> also tried removing and re-adding upstream.
>> 
>> Any help would be appreciated.
>> 
>> Best,
>> ---
>> Christopher Eeles
>> Software Developer
>> BHK Laboratory<http://www.bhklab.ca/ 
>> <https://nam11.safelinks.protection.outlook.com/?url=http%3A%2F%2Fwww.bhklab.ca%2F&data=02%7C01%7C%7C27cb7946457d4b13907108d807e1a694%7C84df9e7fe9f640afb435aaaaaaaaaaaa%7C1%7C0%7C637268013222081479&sdata=JFmkXRxuxJJG1FE%2F0N8Gxq96ocipbuhF1gg0vTw42ic%3D&reserved=0>>
>> Princess Margaret Cancer Centre<https://www.pmgenomics.ca/pmgenomics/ 
>> <https://nam11.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.pmgenomics.ca%2Fpmgenomics%2F&data=02%7C01%7C%7C27cb7946457d4b13907108d807e1a694%7C84df9e7fe9f640afb435aaaaaaaaaaaa%7C1%7C0%7C637268013222081479&sdata=LnvKW%2Bl38rc88zsHldvPPPnkDmqOLvlp9fAiG0PWRRQ%3D&reserved=0>>
>> University Health Network<http://www.uhn.ca/ 
>> <https://nam11.safelinks.protection.outlook.com/?url=http%3A%2F%2Fwww.uhn.ca%2F&data=02%7C01%7C%7C27cb7946457d4b13907108d807e1a694%7C84df9e7fe9f640afb435aaaaaaaaaaaa%7C1%7C0%7C637268013222081479&sdata=08gO6fz73rMPzceX0dlITunPHbeZnz8LsTzyQKCVToc%3D&reserved=0>>
>> 
>> 
>> 
>> 
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>> 
>> _______________________________________________
>> Bioc-devel@r-project.org <mailto:Bioc-devel@r-project.org> mailing list
>> https://stat.ethz.ch/mailman/listinfo/bioc-devel 
>> <https://nam11.safelinks.protection.outlook.com/?url=https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel&data=02%7C01%7C%7C27cb7946457d4b13907108d807e1a694%7C84df9e7fe9f640afb435aaaaaaaaaaaa%7C1%7C0%7C637268013222091475&sdata=5XGw6j0ckTfkwyns63qIFPbxn1NhZIIw4DdYLust5O8%3D&reserved=0>


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