Hi Levi, Within the RStudio terminal console you can check the contents of the file `/etc/environment`. This should show you a version number
$ cat /etc/environment ‘BIOCONDUCTOR_DOCKER_VERSION = 3.11.11' (The example above is run on a RELEASE_3_11 image) Best, Nitesh > On Aug 4, 2020, at 4:31 AM, Levi Waldron <lwaldron.resea...@gmail.com> wrote: > > Thanks Nitesh! Very much appreciated. I was wondering, is there a way to > inspect the version from _within_ the image, i.e., that could supplement a > sessionInfo() command? > > On Mon, Aug 3, 2020 at 6:30 PM Turaga, Nitesh <nitesh.tur...@roswellpark.org> > wrote: > >> Hello Bioconductor Community, >> >> A quick update about the latest developments on the Bioconductor Docker >> images. >> >> We have updated the ‘devel’ image to inherit from the latest >> ‘rocker/rstudio:4.0.2’ image. This means that the >> `bioconductor/Bioconductor_docker:devel` image, which is now available will >> be running on, >> >> >> 1. Ubuntu 20.04 >> 2. R version 4.0.2 >> 3. Bioconductor version 3.12. >> >> One major update to the system requirements was the installation of the >> ‘libglpk-dev’ which seemed to have caused issues installing the ‘igraph’ >> package. The version number of this image which can be queried through the >> docker command is going to be 3.12.13. >> >> If you pull the updates from dockerhub using, >> >> docker pull bioconductor/Bioconductor_docker:devel >> >> And check the version number using, (the result is going to be 3.12.13. >> >> docker inspect --format '{{ index .Config.Labels.version}}' >> bioconductor/bioconductor_docker:devel >> >> >> NOTE: The release image stayed exactly the same but with the addition of >> the `libglpk-dev` package. The RELEASE_3_11 image did not get updated to >> Ubuntu 20.04. It is still based on Ubuntu 18.04. The devel image now works >> on a different version of Ubuntu (20.04) as compared to the build system >> (18.04. The support for the 18.04 image on rocker is no longer available. >> >> The inspect label command for RELEASE_3_11 (given below) should produce >> the new version number 3.11.11. Do not forget to pull. This is a bug fix >> with regards to the igraph package’s missing dependency. >> >> docker inspect --format '{{ index .Config.Labels.version}}' >> bioconductor/bioconductor_docker:RELEASE_3_11 >> >> >> If you have any further questions, please reply to this thread. >> >> Best regards, >> >> Nitesh Turaga >> Bioconductor Core Team >> >> >> This email message may contain legally privileged and/or confidential >> information. If you are not the intended recipient(s), or the employee or >> agent responsible for the delivery of this message to the intended >> recipient(s), you are hereby notified that any disclosure, copying, >> distribution, or use of this email message is prohibited. If you have >> received this message in error, please notify the sender immediately by >> e-mail and delete this email message from your computer. Thank you. >> [[alternative HTML version deleted]] >> >> _______________________________________________ >> Bioc-devel@r-project.org mailing list >> https://stat.ethz.ch/mailman/listinfo/bioc-devel >> > > > -- > > Levi Waldron > > Associate Professor > > Department of Epidemiology and Biostatistics > > CUNY Graduate School of Public Health and Health Policy > > Institute for Implementation Science in Population Health > > 55 W 125th St, New York NY 10035 > > https://waldronlab.io > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel