Your push went through. This is a different issue. I’ll look into it tomorrow.
Thanks, Nitesh > On Sep 6, 2020, at 12:44 PM, Alina Selega <alina.sel...@gmail.com> wrote: > > Sorry, looks like the error got mangled. I pasted it in this gist: > https://gist.github.com/alinaselega/f5c4f724309211cc4a5bedd2a05bfd1e > > Thanks, > Alina > > On Sun, 6 Sep 2020 at 12:36, Alina Selega <alina.sel...@gmail.com> wrote: > >> Hi, >> >> I wanted to re-add a license file to my repository which got misplaced (no >> changes to code). I followed the instructions in this link ( >> https://bioconductor.org/developers/how-to/git/pull-upstream-changes/) to >> pull upstream changes. >> >> I then followed these instructions ( >> https://bioconductor.org/developers/how-to/git/push-to-github-bioc/). I >> successfully pushed the file to my Github repo, but when I reached step 6 >> to push the changes to Bioconductor, I got the following errors: >> >> ``` >> Counting objects: 3, done. >> Delta compression using up to 8 >> threads. >> Compressing objects: 100% (3/3), done. >> Writing objects: 100% (3/3), 12.11 KiB | 6.05 >> MiB/s, done. Total 3 (delta 1), reused 1 >> (delta 0) >> remote: fatal: this operation must be run in a work tree >> remote: ERROR:root:Exception: Command '['git', >> 'rev-parse', '--show-toplevel']' returned non-zero exit status 128 >> remote: ERROR:root:local variable 'package_name' referenced before >> assignment >> remote: Note: failed to update RSS feed;git repository updated >> successfully. To git.bioconductor.org:packages/BUMHMM.git >> bbafa73..160b7a7 master -> master >> ``` >> >> It appears that the upstream updated successfully but can you advise about >> the errors? >> >> Thank you, >> Alina >> >> > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
