Nice images!
If I narrow the browser window, the figures appear!
When I 'inspect' the source, for instance for 'Figure 4: chance of cross talk'
I see that the image has tag <img ... class="smallfigure"> whereas figures that
show up have class="widefigure".
I guess smallfigure is because in the Rmd there is
```{r, fig.cap = "Chance of crosslinking", fig.small = TRUE, echo = FALSE}
# fig.width=200, out.width="200px"
knitr::include_graphics("crosslinking_chance.png")
```
So this looks like a bug in BiocStyle...
I opened an issue at
https://github.com/Bioconductor/BiocStyle/issues/83
Martin
On 11/19/20, 8:28 AM, "Bioc-devel on behalf of Sudeep Sahadevan"
<bioc-devel-boun...@r-project.org on behalf of sudeep.sahade...@embl.de> wrote:
Dear all,
We are facing some issues with the html vignette of our package DEWSeq (
https://bioconductor.org/packages/release/bioc/vignettes/DEWSeq/inst/doc/DEWSeq.html).
The issue is that some of the images are rendered too small and
for a couple of images, the size of the final rendered images is 0 x 0
pixels (that is, only the figure captions are visible). What I've also noticed
is that this issue does not occur when I build package locally based on the
bioconductor docker image for RELEASE_3_12 (
https://hub.docker.com/layers/bioconductor/bioconductor_docker/RELEASE_3_12/images/sha256-9f9d1d481e51e335db273621e82841117851b0de4e28984a7b3ada03b32046ad?context=explore
). I'm not entirely sure what is going on here. Have you faced this issue/
do you have any suggestions ?
Thank you in advance,
Kind regards,
Sudeep Sahadevan.
[[alternative HTML version deleted]]
_______________________________________________
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel
_______________________________________________
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel
