This problem has been recognized: https://github.com/cboettig/knitcitations/issues/107
In a few days it will likely clear. On Wed, Nov 25, 2020 at 10:26 PM Eeles, Christopher < christopher.ee...@uhnresearch.ca> wrote: > Hello Bioc community, > > I am the maintainer for PharmacoGx and have noticed that I have an error > on all platforms of the devel branch related to the knitcitations package. > > > * checking for file ‘PharmacoGx/DESCRIPTION’ ... OK > * preparing ‘PharmacoGx’: > * checking DESCRIPTION meta-information ... OK > * installing the package to build vignettes > * creating vignettes ... ERROR > --- re-building ‘CreatingPharmacoSet.Rmd’ using rmarkdown > Quitting from lines 79-82 (CreatingPharmacoSet.Rmd) > Error: processing vignette 'CreatingPharmacoSet.Rmd' failed with > diagnostics: > there is no package called 'knitcitations' > --- failed re-building ‘CreatingPharmacoSet.Rmd’ > > --- re-building ‘PharmacoGx.Rmd’ using rmarkdown > Quitting from lines 79-82 (PharmacoGx.Rmd) > Error: processing vignette 'PharmacoGx.Rmd' failed with diagnostics: > there is no package called 'knitcitations' > --- failed re-building ‘PharmacoGx.Rmd’ > > SUMMARY: processing the following files failed: > ‘CreatingPharmacoSet.Rmd’ ‘PharmacoGx.Rmd’ > > Error: Vignette re-building failed. > Execution halted > > The package builds fine on the release branch with the same vignettes and > knitcitations in the suggests field of the description. > > Any advice on how I can fix this? It seems like my suggests aren't being > installed on the devel branch. > > Thanks for your assistance. > > Best, > Christopher Eeles > Software Developer > Benjamin Haibe-Kains Lab > Princess Margaret Cancer Centre > > This e-mail may contain confidential and/or privileged i...{{dropped:22}} > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel > -- The information in this e-mail is intended only for the ...{{dropped:18}} _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel