EWCE may need to be reviewed for reinclusion. I tried to check on R-devel with the repo you mentioned. Do you have a current personal repo that passes check with Bioc 3.13/R-devel?
Quitting from lines 220-223 (EWCE.Rmd) Error: processing vignette 'EWCE.Rmd' failed with diagnostics: Invalid attribute(s): percentage_gc_content Please use the function 'listAttributes' to get valid attribute names --- failed re-building ‘EWCE.Rmd’ On Thu, Feb 11, 2021 at 9:41 AM Murphy, Alan E <a.mur...@imperial.ac.uk> wrote: > Hi all, > > My apologies in advance if this is not the correct mailing list for this > question, regarding development to the EWCE Bioconductor package. > > I work as part of Dr. Nathan Skene's group who submitted the package EWCE< > https://bioconductor.riken.jp/packages/3.5/bioc/html/EWCE.html#since> to > Bioconductor some years ago. The package fell out of maintenance and as > such was deprecated from Bioconductor 3.6. We are working to update and > hopefully, reinstate the package but are running into issues when pushing > any changes to Bioconductor. We have been following instructions here< > http://bioconductor.org/developers/how-to/git/sync-existing-repositories/> > to try and sync our Github updates with the Bioconductor version but can't > seem to push the new, merged version to Bioconductor. > > To test the cause of the issue, we cloned the repo: > > git clone https://git.bioconductor.org/packages/EWCE > > And updated the version of the package in the DESCRIPTION file and tried > pushing the change, using Nathan's account which is associated with the > package. However, we still can't push to Bioconductor, getting the error: > > > -bash-4.2$ git push origin master > FATAL: W any packages/EWCE n.skene DENIED by fallthru > (or you mis-spelled the reponame) > fatal: Could not read from remote repository.Please make sure you have the > correct access rights > and the repository exists. > > It appears it does recognise Nathan's account but doesn't think he has > access rights to the repo. It is worth noting that EWCE is also not listed > on his account's webpage. > > We are wondering if this issue is caused by EWCE being deprecated and if > so, what are the necessary steps to reinstate it? > > Kind regards, > Alan. > > Alan Murphy > Bioinformatician > Neurogenomics lab > UK Dementia Research Institute > Imperial College London > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel > -- The information in this e-mail is intended only for the ...{{dropped:18}} _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
