Related: Does Bioconductor support 'Additional_repositories'? From RWE: The ‘Additional_repositories’ field is a comma-separated list of repository URLs where the packages named in the other fields may be found. It is currently used by R CMD check to check that the packages can be found, at least as source packages (which can be installed on any platform).
FWIW, CRAN allows/supports them (I've only used them for packages under 'Suggests:'). /Henrik On Tue, Mar 2, 2021 at 4:02 AM Rainer Johannes <johannes.rai...@eurac.edu> wrote: > > thanks for the quick reply Lori! > > OK, so we will have to submit the package to Bioc ASAP. > > cheers, jo > > > On 2 Mar 2021, at 12:51, Kern, Lori <lori.sheph...@roswellpark.org> wrote: > > > > Currently the builders do not allow the user of remotes and you would have > > to wait for it to be submitted to CRAN or Bioconductor. All Bioconductor > > dependencies must be on CRAN or Bioconductor. > > > > Get Outlook for iOS > > From: Bioc-devel <bioc-devel-boun...@r-project.org> on behalf of Rainer > > Johannes <johannes.rai...@eurac.edu> > > Sent: Tuesday, March 2, 2021 4:36:05 AM > > To: bioc-devel <bioc-devel@r-project.org> > > Subject: [Bioc-devel] Remotes in DESCRIPTION not supported for BioC? > > > > Dear All! > > > > in one of the xcms vignettes we are using a R package which is not yet in > > Bioconductor and I added > > > > Remotes: > > RforMassSpectrometry/MsBackendMgf > > > > to the DESCRIPTION thinking that on the BioC build machines the package > > might get installed (from github). It does apparently not as we get ERROR > > for this vignette. Is there any way I can use a non-Bioconductor and > > non-CRAN package or do I have to wait until the package is included in > > Bioconductor? > > > > thanks for any feedback! > > > > cheers, jo > > _______________________________________________ > > Bioc-devel@r-project.org mailing list > > https://secure-web.cisco.com/1H1jWIWyghkLhLM5RAXwwfoWK4PlOlae4Pc1-a_NRbOIOuLSLHtGAyInV-z8t0fCgCfVH0nxURKnBN77cdDWaaKfCoZMnqX4XshZNWoi44Ko2dWmnDvV5BjARxeduRCCmoKigDovJkvgYgbecL-t9v9m2HGULeKeb9va8J3NlYFXnVkCDGyzsNgbeZSN2VlWCKhLL1vQqlJEiglEPQraiCYfRjZdnxkQsRcLPnIkfvjbIHJWHFz0LYJRGav4iCiARcWCn0Uo0qe8ieknAiGloqMR2HJHD6oUNCdG8v7oYy73oVejgIqxYBbvJsrztDawr/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel > > > > > > This email message may contain legally privileged and/or confidential > > information. If you are not the intended recipient(s), or the employee or > > agent responsible for the delivery of this message to the intended > > recipient(s), you are hereby notified that any disclosure, copying, > > distribution, or use of this email message is prohibited. If you have > > received this message in error, please notify the sender immediately by > > e-mail and delete this email message from your computer. Thank you. > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
