Good morning Hervé, Thank you - I checked Monday am, and sure enough those errors were resolved. Best,Shraddha
On Fri, Apr 30, 2021 at 8:51 PM Hervé Pagès <hpages.on.git...@gmail.com> wrote: > Hi Shraddha, > > Hundreds of Bioconductor packages are affected since yesterday. Please > ignore. > > Today we've upgraded R to R 4.1 alpha on machv2, and made a tweak to the > setup, so hopefully these errors will be gone on tomorrow's report. > > Best, > H. > > On 4/30/21 2:46 PM, Shraddha Pai wrote: > > Hello BioC community, > > My package netDx is building correctly on Linux but has the following > > issues on Mac: > > When running the vignette BuildPredictor.Rmd, > > 1) we get the error: Warning in doTryCatch(return(expr), name, parentenv, > > handler) : > > > > no font could be found for family "Arial" > > > > 2) the vignette then ends with the error: > > > > Error: processing vignette 'BuildPredictor.Rmd' failed with diagnostics: > > > > polygon edge not found > > > > > > Why would the package have this error on Macs and not on Linux machines? > > And the error had not previously occurred. It seems to have occurred with > > an old vignette (not the one I recently added). > > > > > > One thing I had to change recently was to change the vignette building > > method for all vignettes, from knitr::knitr to knitr::rmarkdown, but I > only > > did it because I was getting a never-before-seen vignette building > related > > error for which I found this solution. Was this change a mistake? > > > > > > Any thoughts would be appreciated. > > > > Thanks, > > Shraddha > > > > -- > > > > *Shraddha Pai, PhD* > > Independent Investigator > > shraddhapai.com; @spaiglass on Twitter > > > > > > *Ontario Institute for Cancer Research* > > MaRS Centre, 661 University Avenue, Suite 510, Toronto, Ontario, Canada > M5G > > 0A3 > > *@OICR_news* <https://twitter.com/oicr_news> | *www.oicr.on.ca* > > <http://www.oicr.on.ca/> > > > > > > > > *Collaborate. Translate. Change lives.* > > > > > > > > This message and any attachments may contain confidentia...{{dropped:11}} > > > > _______________________________________________ > > Bioc-devel@r-project.org mailing list > > https://stat.ethz.ch/mailman/listinfo/bioc-devel > > > > -- > Hervé Pagès > > Bioconductor Core Team > hpages.on.git...@gmail.com > [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
